Literature DB >> 8875056

Automatic multiparameter fluorescence imaging for determining lymphocyte phenotype and activation status in melanoma tissue sections.

A I Dow1, S A Shafer, J M Kirkwood, R A Mascari, A S Waggoner.   

Abstract

A system has been developed that combines multiparameter fluorescence imaging and computer vision techniques to provide automatic phenotyping of multiple cell types in a single tissue section. This system identifies both the nuclear and cytoplasmic boundary of each cell. A routine based on the watershed algorithm has been developed to segment an image of Hoechst-stained nuclei with an accuracy of greater than 85%. Deformable splines initially positioned at the nuclear boundaries are applied to images of fluorescently labelled cell-surface antigens. The splines lock onto the peak fluorescence signal surrounding the cell, providing an estimate of the cell boundary. From measurements acquired at this boundary, each cell is classified according to antigen expression. The system has been piloted in biopsies from melanoma patients participating in a clinical trial of the antibody R24. Thin tissue sections have been stained with Hoechst and three different fluorescent antibodies to antigens that permit the typing and evaluation of activity of T-cells. Changes in the infiltrates evaluated by multiparameter imaging were consistent with results obtained by immunoperoxidase analysis. The multiparameter fluorescent technique enables simultaneous determination of multiple cell subsets and can provide the spatial relationships of each cell type within the tissue.

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Year:  1996        PMID: 8875056     DOI: 10.1002/(SICI)1097-0320(19960901)25:1<71::AID-CYTO8>3.0.CO;2-H

Source DB:  PubMed          Journal:  Cytometry        ISSN: 0196-4763


  5 in total

1.  Segmentation of whole cells and cell nuclei from 3-D optical microscope images using dynamic programming.

Authors:  D P McCullough; P R Gudla; B S Harris; J A Collins; K J Meaburn; M A Nakaya; T P Yamaguchi; T Misteli; S J Lockett
Journal:  IEEE Trans Med Imaging       Date:  2008-05       Impact factor: 10.048

2.  Tracking epithelial cell junctions in C. elegans embryogenesis with active contours guided by SIFT flow.

Authors:  Sukryool Kang; Chen-Yu Lee; Monira Gonçalves; Andrew D Chisholm; Pamela C Cosman
Journal:  IEEE Trans Biomed Eng       Date:  2014-04-22       Impact factor: 4.538

3.  A flexible and robust approach for segmenting cell nuclei from 2D microscopy images using supervised learning and template matching.

Authors:  Cheng Chen; Wei Wang; John A Ozolek; Gustavo K Rohde
Journal:  Cytometry A       Date:  2013-04-08       Impact factor: 4.355

4.  CellSegm - a MATLAB toolbox for high-throughput 3D cell segmentation.

Authors:  Erlend Hodneland; Tanja Kögel; Dominik Michael Frei; Hans-Hermann Gerdes; Arvid Lundervold
Journal:  Source Code Biol Med       Date:  2013-08-09

5.  Robust Cell Detection for Large-Scale 3D Microscopy Using GPU-Accelerated Iterative Voting.

Authors:  Leila Saadatifard; Louise C Abbott; Laura Montier; Jokubas Ziburkus; David Mayerich
Journal:  Front Neuroanat       Date:  2018-04-26       Impact factor: 3.856

  5 in total

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