Literature DB >> 8863429

Analysis of the beta' subunit of DNA-dependent RNA polymerase does not support the hypothesis inferred from 16S rRNA analysis that Oenococcus oeni (formerly Leuconostoc oenos) is a tachytelic (fast-evolving) bacterium.

R Morse1, M D Collins, K O'Hanlon, S Wallbanks, P T Richardson.   

Abstract

rRNA sequencing has shown that leuconostocs comprise three distinct phylogenetic lineages which have been designated separate genera (viz., the genera Leuconostoc sensu stricto, Oenococcus, and Weissella). In addition, the 16S rRNA line formed by Oenococcus oeni (formerly Leuconostoc oenos) is exceptionally long; this fact, together with variations in the compositions of conserved positions in the 16S rRNA, has led to the hypothesis (D. Yang and C. R. Woese, Syst. Appl. Microbiol. 12:145-149, 1989) that this organism is a fast-evolving bacterium. Previous evidence that the leuconostocs should be divided into three genera and that O. oeni is an example of tachytelic evolution has come solely from rRNA analyses. In this study we seqenced the rpoC gene encoding the beta' subunit of DNA-dependent RNA polymerase of leuconostocs and performed a comparative phylogenetic analysis. The subdivision of the leuconostocs into three distinct lineages was confirmed by the rpoC gene data, but no evidence that indicated that O. oeni is evolving at an extraordinary rate was found. If O. oeni is truly tachytelic, then fast-evolving phenomena would be expected to occur throughout the whole genome, including this independent molecular chronometer.

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Year:  1996        PMID: 8863429     DOI: 10.1099/00207713-46-4-1004

Source DB:  PubMed          Journal:  Int J Syst Bacteriol        ISSN: 0020-7713


  5 in total

1.  rpoB-based microbial community analysis avoids limitations inherent in 16S rRNA gene intraspecies heterogeneity.

Authors:  I Dahllöf; H Baillie; S Kjelleberg
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

2.  Globicatella bacteraemia identified by 16S ribosomal RNA gene sequencing.

Authors:  S K P Lau; P C Y Woo; N K H Li; J L L Teng; K-W Leung; K H L Ng; T-L Que; K-Y Yuen
Journal:  J Clin Pathol       Date:  2006-03       Impact factor: 3.411

3.  Multilocus sequence typing of Oenococcus oeni: detection of two subpopulations shaped by intergenic recombination.

Authors:  Eric Bilhère; Patrick M Lucas; Olivier Claisse; Aline Lonvaud-Funel
Journal:  Appl Environ Microbiol       Date:  2008-12-29       Impact factor: 4.792

4.  Detection and quantification of Flavobacterium psychrophilum in water and fish tissue samples by quantitative real time PCR.

Authors:  Nicole Strepparava; Thomas Wahli; Helmut Segner; Orlando Petrini
Journal:  BMC Microbiol       Date:  2014-04-26       Impact factor: 3.605

5.  High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria.

Authors:  Ouided Benslama; Abderrahmane Boulahrouf
Journal:  Genom Data       Date:  2016-04-14
  5 in total

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