Literature DB >> 8855218

Cation-pi interactions in aromatics of biological and medicinal interest: electrostatic potential surfaces as a useful qualitative guide.

S Mecozzi1, A P West, D A Dougherty.   

Abstract

The cation-pi interaction is an important, general force for molecular recognition in biological receptors. Through the sidechains of aromatic amino acids, novel binding sites for cationic ligands such as acetylcholine can be constructed. We report here a number of calculations on prototypical cation-pi systems, emphasizing structures of relevance to biological receptors and prototypical heterocycles of the type often of importance in medicinal chemistry. Trends in the data can be rationalized using a relatively simple model that emphasizes the electrostatic component of the cation-pi interaction. In particular, plots of the electrostatic potential surfaces of the relevant aromatics provide useful guidelines for predicting cation-pi interactions in new systems.

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Year:  1996        PMID: 8855218      PMCID: PMC38193          DOI: 10.1073/pnas.93.20.10566

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  4 in total

1.  A mechanism for ion selectivity in potassium channels: computational studies of cation-pi interactions.

Authors:  R A Kumpf; D A Dougherty
Journal:  Science       Date:  1993-09-24       Impact factor: 47.728

2.  Acetylcholine binding by a synthetic receptor: implications for biological recognition.

Authors:  D A Dougherty; D A Stauffer
Journal:  Science       Date:  1990-12-14       Impact factor: 47.728

Review 3.  Proposed cation-pi mediated binding by factor Xa: a novel enzymatic mechanism for molecular recognition.

Authors:  Z Lin; M E Johnson
Journal:  FEBS Lett       Date:  1995-08-14       Impact factor: 4.124

Review 4.  Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp.

Authors:  D A Dougherty
Journal:  Science       Date:  1996-01-12       Impact factor: 47.728

  4 in total
  120 in total

1.  Cation-pi effects in the complexation of Na+ and K+ with Phe, Tyr, and Trp in the gas phase.

Authors:  V Ryzhov; R C Dunbar; B Cerda; C Wesdemiotis
Journal:  J Am Soc Mass Spectrom       Date:  2000-12       Impact factor: 3.109

2.  Substituent effects on cation-pi interactions: a quantitative study.

Authors:  Christopher A Hunter; Caroline M R Low; Carmen Rotger; Jeremy G Vinter; Cristiano Zonta
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

3.  The geometry and efficacy of cation-pi interactions in a diagonal position of a designed beta-hairpin.

Authors:  Chad D Tatko; Marcey L Waters
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

4.  Cation-pi interactions studied in a model coiled-coil peptide.

Authors:  Morris M Slutsky; E Neil G Marsh
Journal:  Protein Sci       Date:  2004-07-06       Impact factor: 6.725

5.  Exploring purine N7 interactions via atomic mutagenesis: the group I ribozyme as a case study.

Authors:  Marcello Forconi; Tara Benz-Moy; Kristin Rule Gleitsman; Eliza Ruben; Clyde Metz; Daniel Herschlag
Journal:  RNA       Date:  2012-04-27       Impact factor: 4.942

6.  Cation-pi interaction regulates ligand-binding affinity and signaling of integrin alpha4beta7.

Authors:  YouDong Pan; Kun Zhang; JunPeng Qi; Jiao Yue; Timothy A Springer; JianFeng Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-22       Impact factor: 11.205

7.  Insights into Thiol-Aromatic Interactions: A Stereoelectronic Basis for S-H/π Interactions.

Authors:  Christina R Forbes; Sudipta K Sinha; Himal K Ganguly; Shi Bai; Glenn P A Yap; Sandeep Patel; Neal J Zondlo
Journal:  J Am Chem Soc       Date:  2017-01-30       Impact factor: 15.419

8.  Efficacy and cytotoxicity in cell culture of novel α-hydroxytropolone inhibitors of hepatitis B virus ribonuclease H.

Authors:  Elena Lomonosova; Jil Daw; Aswin K Garimallaprabhakaran; Nana B Agyemang; Yashkumar Ashani; Ryan P Murelli; John E Tavis
Journal:  Antiviral Res       Date:  2017-06-17       Impact factor: 5.970

9.  A Catalytic Role for C-H/π Interactions in Base Excision Repair by Bacillus cereus DNA Glycosylase AlkD.

Authors:  Zachary D Parsons; Joshua M Bland; Elwood A Mullins; Brandt F Eichman
Journal:  J Am Chem Soc       Date:  2016-09-01       Impact factor: 15.419

10.  Close mimicry of lung surfactant protein B by "clicked" dimers of helical, cationic peptoids.

Authors:  Michelle T Dohm; Shannon L Seurynck-Servoss; Jiwon Seo; Ronald N Zuckermann; Annelise E Barron
Journal:  Biopolymers       Date:  2009       Impact factor: 2.505

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