Literature DB >> 8849878

Evolution of fitness in experimental populations of vesicular stomatitis virus.

S F Elena1, F González-Candelas, I S Novella, E A Duarte, D K Clarke, E Domingo, J J Holland, A Moya.   

Abstract

The evolution of fitness in experimental clonal populations of vesicular stomatitis virus (VSV) has been compared under different genetic (fitness of initial clone) and demographic (population dynamics) regimes. In spite of the high genetic heterogeneity among replicates within experiments, there is a clear effect of population dynamics on the evolution of fitness. Those populations that went through strong periodic bottlenecks showed a decreased fitness in competition experiments with wild type. Conversely, mutant populations that were transferred under the dynamics of continuous population expansions increased their fitness when compared with the same wild type. The magnitude of the observed effect depended on the fitness of the original viral clone. Thus, high fitness clones showed a larger reduction in fitness than low fitness clones under dynamics with included periodic bottleneck. In contrast, the gain in fitness was larger the lower the initial fitness of the viral clone. The quantitative genetic analysis of the trait "fitness" in the resulting populations shows that genetic variation for the trait is positively correlated with the magnitude of the change in the same trait. The results are interpreted in terms of the operation of Muller's ratchet and genetic drift as opposed to the appearance of beneficial mutations.

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Year:  1996        PMID: 8849878      PMCID: PMC1207009     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  27 in total

1.  Isolation and characterization of conditional lethal amber nonsense mutants of vesicular stomatitis virus.

Authors:  B T White; D J McGeoch
Journal:  J Gen Virol       Date:  1987-12       Impact factor: 3.891

2.  Sequences of the major antibody binding epitopes of the Indiana serotype of vesicular stomatitis virus.

Authors:  S B Vandepol; L Lefrancois; J J Holland
Journal:  Virology       Date:  1986-01-30       Impact factor: 3.616

3.  High nucleotide substitution error frequencies in clonal pools of vesicular stomatitis virus.

Authors:  D A Steinhauer; J C de la Torre; J J Holland
Journal:  J Virol       Date:  1989-05       Impact factor: 5.103

4.  Virus mutation frequencies can be greatly underestimated by monoclonal antibody neutralization of virions.

Authors:  J J Holland; J C de la Torre; D A Steinhauer; D Clarke; E Duarte; E Domingo
Journal:  J Virol       Date:  1989-12       Impact factor: 5.103

5.  Evolution of human influenza A viruses over 50 years: rapid, uniform rate of change in NS gene.

Authors:  D A Buonagurio; S Nakada; J D Parvin; M Krystal; P Palese; W M Fitch
Journal:  Science       Date:  1986-05-23       Impact factor: 47.728

Review 6.  Rapid evolution of RNA viruses.

Authors:  D A Steinhauer; J J Holland
Journal:  Annu Rev Microbiol       Date:  1987       Impact factor: 15.500

Review 7.  Rapid evolution of RNA genomes.

Authors:  J Holland; K Spindler; F Horodyski; E Grabau; S Nichol; S VandePol
Journal:  Science       Date:  1982-03-26       Impact factor: 47.728

8.  The accumulation of deleterious genes in a population--Muller's Ratchet.

Authors:  J Haigh
Journal:  Theor Popul Biol       Date:  1978-10       Impact factor: 1.570

9.  Nucleotide sequence heterogeneity of an RNA phage population.

Authors:  E Domingo; D Sabo; T Taniguchi; C Weissmann
Journal:  Cell       Date:  1978-04       Impact factor: 41.582

10.  Direct method for quantitation of extreme polymerase error frequencies at selected single base sites in viral RNA.

Authors:  D A Steinhauer; J J Holland
Journal:  J Virol       Date:  1986-01       Impact factor: 5.103

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  21 in total

1.  Diminishing returns of population size in the rate of RNA virus adaptation.

Authors:  R Miralles; A Moya; S F Elena
Journal:  J Virol       Date:  2000-04       Impact factor: 5.103

2.  Combining mathematics and empirical data to predict emergence of RNA viruses that differ in reservoir use.

Authors:  C Brandon Ogbunugafor; Sanjay Basu; Nadya M Morales; Paul E Turner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-06-27       Impact factor: 6.237

3.  Dynamics of in vitro fitness recovery of HIV-1.

Authors:  Ramón Lorenzo-Redondo; Antonio V Bordería; Cecilio Lopez-Galindez
Journal:  J Virol       Date:  2010-11-24       Impact factor: 5.103

4.  Mother-to-Child HIV Transmission Bottleneck Selects for Consensus Virus with Lower Gag-Protease-Driven Replication Capacity.

Authors:  Vanessa L Naidoo; Jaclyn K Mann; Christie Noble; Emily Adland; Jonathan M Carlson; Jake Thomas; Chanson J Brumme; Christina F Thobakgale-Tshabalala; Zabrina L Brumme; Mark A Brockman; Philip J R Goulder; Thumbi Ndung'u
Journal:  J Virol       Date:  2017-08-10       Impact factor: 5.103

5.  Exponential fitness gains of RNA virus populations are limited by bottleneck effects.

Authors:  I S Novella; J Quer; E Domingo; J J Holland
Journal:  J Virol       Date:  1999-02       Impact factor: 5.103

6.  Subtype-Specific Differences in Gag-Protease-Driven Replication Capacity Are Consistent with Intersubtype Differences in HIV-1 Disease Progression.

Authors:  Marion W Kiguoya; Jaclyn K Mann; Denis Chopera; Kamini Gounder; Guinevere Q Lee; Peter W Hunt; Jeffrey N Martin; T Blake Ball; Joshua Kimani; Zabrina L Brumme; Mark A Brockman; Thumbi Ndung'u
Journal:  J Virol       Date:  2017-06-09       Impact factor: 5.103

7.  Rapid adaptation of a recombinant vesicular stomatitis virus to a targeted cell line.

Authors:  Yanhua Gao; Patricia Whitaker-Dowling; Simon C Watkins; Judith A Griffin; Ira Bergman
Journal:  J Virol       Date:  2006-09       Impact factor: 5.103

8.  Unusual distribution of mutations associated with serial bottleneck passages of human immunodeficiency virus type 1.

Authors:  E Yuste; C López-Galíndez; E Domingo
Journal:  J Virol       Date:  2000-10       Impact factor: 5.103

9.  A single amino acid change resulting in loss of fluorescence of eGFP in a viral fusion protein confers fitness and growth advantage to the recombinant vesicular stomatitis virus.

Authors:  Phat X Dinh; Debasis Panda; Phani B Das; Subash C Das; Anshuman Das; Asit K Pattnaik
Journal:  Virology       Date:  2012-07-24       Impact factor: 3.616

10.  Mosquitoes put the brake on arbovirus evolution: experimental evolution reveals slower mutation accumulation in mosquito than vertebrate cells.

Authors:  Nikos Vasilakis; Eleanor R Deardorff; Joan L Kenney; Shannan L Rossi; Kathryn A Hanley; Scott C Weaver
Journal:  PLoS Pathog       Date:  2009-06-05       Impact factor: 6.823

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