Literature DB >> 8834775

Cryoenzymology: how to practice kinetic and structural studies.

F Travers1, T Barman.   

Abstract

For a full understanding of an enzyme reaction pathway, one must identify the reaction intermediates and obtain their structures and rates of interconversion. It is impossible to obtain all this information under normal conditions. An approach is to work suboptimally, in particular at subzero temperatures. This is cryoenzymology, an approach that implies both kinetic and structural measurements on enzyme systems below 0 degrees C. To work below 0 degrees C one must add an antifreeze so cryoenzymology means perturbation by two agents: temperature and antifreeze, usually an organic solvent. Certain precautions are needed with these agents, which we will discuss here. In particular, we discuss the importance of choosing the right solvent: this requires extensive exploratory studies but it is the key for the successful practice of cryoenzymology. Each system has its particularities and its own 'good' solvent. Cryoenzymology is not only a way of reducing reaction rates, it is also a way of perturbing one's system. Thus, it is a method that allows for the accumulation of intermediates that cannot be observed under normal conditions by slowing down their kinetics of formation, by changes in rate limiting steps or by shifts in equilibria. We illustrate the usefulness of cryoenzymology by myosin and actomyosin ATPases and by creatine, arginine and 3-phosphoglycerate kinases. We also discuss recent results obtained by X-ray crystallography.

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Year:  1995        PMID: 8834775     DOI: 10.1016/0300-9084(95)80005-0

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  6 in total

Review 1.  Why choose myofibrils to study muscle myosin ATPase?

Authors:  Corinne Lionne; Bogdan Iorga; Robin Candau; Franck Travers
Journal:  J Muscle Res Cell Motil       Date:  2003       Impact factor: 2.698

2.  Resolution and Characterization of Chemical Steps in Enzyme Catalytic Sequences by Using Low-Temperature and Time-Resolved, Full-Spectrum EPR Spectroscopy in Fluid Cryosolvent and Frozen Solution Systems.

Authors:  Miao Wang; Chen Zhu; Meghan Kohne; Kurt Warncke
Journal:  Methods Enzymol       Date:  2015-09-14       Impact factor: 1.600

3.  Cryoenzymology of the hammerhead ribozyme.

Authors:  A L Feig; G E Ammons; O C Uhlenbeck
Journal:  RNA       Date:  1998-10       Impact factor: 4.942

4.  Probing the coupling of Ca2+ and rigor activation of rabbit psoas myofibrillar ATPase with ethylene glycol.

Authors:  R Stehle; C Lionne; F Travers; T Barman
Journal:  J Muscle Res Cell Motil       Date:  1998-05       Impact factor: 2.698

5.  Temperature-dependent activity of kinesins is regulable.

Authors:  F Doval; K Chiba; R J McKenney; K M Ori-McKenney; M D Vershinin
Journal:  Biochem Biophys Res Commun       Date:  2020-06-04       Impact factor: 3.575

6.  Density and electron density of aqueous cryoprotectant solutions at cryogenic temperatures for optimized cryoprotection and diffraction contrast.

Authors:  Timothy J Tyree; Ritwik Dan; Robert E Thorne
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-04-27       Impact factor: 7.652

  6 in total

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