Literature DB >> 8810310

High resolution crystal structures of the deoxy, oxy, and aquomet forms of cobalt myoglobin.

E A Brucker1, J S Olson, G N Phillips, Y Dou, M Ikeda-Saito.   

Abstract

The structures of the deoxy, oxy, and aquomet forms of native sperm whale myoglobin reconstituted with cobalt protoporphyrin IX have been determined by x-ray crystallography. As expected, cobalt myoglobin closely resembles native iron myoglobin in overall structure, especially in their respective aquomet forms. In the cobalt oxymyoglobin structure, the Nepsilon of distal histidine 64 lies within hydrogen bonding distance to both the oxygen atom directly bonded to the cobalt and the terminal oxygen atom, in agreement with previous EPR and resonance Raman studies. The metal atom in cobaltous myoglobin does show a small 0.06-A out-of-porphyrin plane displacement when moving from the oxy to deoxy state. In the case of the native iron-containing myoglobin, the oxy to deoxy transition results in a larger 0.16-A displacement of the metal farther out of the porphyrin plane, attributed to an increase in spin from S = 0 to S = 2. The small displacement in cobalt myoglobin is due to a change in coordination geometry, not spin state (S = 1/2 for both cobalt deoxy- and oxymyoglobin). The small out-of-porphyrin plane movement of cobalt which accompanies deoxygenation of myoglobin also occurs in cobalt hemoglobin and serves to explain why cooperativity, although reduced, is still preserved when iron is replaced by cobalt in human hemoglobin.

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Year:  1996        PMID: 8810310     DOI: 10.1074/jbc.271.41.25419

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  16 in total

1.  Blocking the gate to ligand entry in human hemoglobin.

Authors:  Ivan Birukou; Jayashree Soman; John S Olson
Journal:  J Biol Chem       Date:  2010-12-29       Impact factor: 5.157

2.  Structural insights into ligand dynamics: correlated oxygen and picket motion in oxycobalt picket fence porphyrins.

Authors:  Jianfeng Li; Bruce C Noll; Allen G Oliver; W Robert Scheidt
Journal:  J Am Chem Soc       Date:  2012-06-12       Impact factor: 15.419

3.  Temperature-dependent studies of NO recombination to heme and heme proteins.

Authors:  Dan Ionascu; Flaviu Gruia; Xiong Ye; Anchi Yu; Florin Rosca; Chris Beck; Andrey Demidov; John S Olson; Paul M Champion
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

4.  Circular dichroism and site-directed spin labeling reveal structural and dynamical features of high-pressure states of myoglobin.

Authors:  Michael T Lerch; Joseph Horwitz; John McCoy; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

5.  Endogenous insertion of non-native metalloporphyrins into human membrane cytochrome P450 enzymes.

Authors:  Rahul Yadav; Emily E Scott
Journal:  J Biol Chem       Date:  2018-09-14       Impact factor: 5.157

6.  Mapping molecular flexibility of proteins with site-directed spin labeling: a case study of myoglobin.

Authors:  Carlos J López; Shirley Oga; Wayne L Hubbell
Journal:  Biochemistry       Date:  2012-08-09       Impact factor: 3.162

7.  Mapping protein conformational heterogeneity under pressure with site-directed spin labeling and double electron-electron resonance.

Authors:  Michael T Lerch; Zhongyu Yang; Evan K Brooks; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-18       Impact factor: 11.205

Review 8.  Oxygen Activation and Radical Transformations in Heme Proteins and Metalloporphyrins.

Authors:  Xiongyi Huang; John T Groves
Journal:  Chem Rev       Date:  2017-12-29       Impact factor: 60.622

Review 9.  Spectroscopic features of cytochrome P450 reaction intermediates.

Authors:  Abhinav Luthra; Ilia G Denisov; Stephen G Sligar
Journal:  Arch Biochem Biophys       Date:  2010-12-16       Impact factor: 4.013

10.  Structure of REV-ERBβ ligand-binding domain bound to a porphyrin antagonist.

Authors:  Edna Matta-Camacho; Subhashis Banerjee; Travis S Hughes; Laura A Solt; Yongjun Wang; Thomas P Burris; Douglas J Kojetin
Journal:  J Biol Chem       Date:  2014-05-28       Impact factor: 5.157

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