Literature DB >> 8795218

Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium.

F Garcia-Pichel1, L Prufert-Bebout, G Muyzer.   

Abstract

We used micromanipulation to isolate from their environment representative samples of seven geographically distant field populations fitting the description of Microcoleus chthonoplastes (a cyanobacterium) and obtained seven corresponding cultured strains. Samples of both field populations and cultures were phenotypically characterized by microscale techniques, and their partial 16S rRNA gene sequences were compared by denaturing gradient gel electrophoresis and in some cases by sequencing. All field populations and strains were phenotypically extremely coherent, and their 16S rRNA sequences were indistinguishable by DGGE. The sequences determined were identical or virtually identical. Thus, M. chthonoplastes represents a single, well-delimited taxon with a truly cosmopolitan distribution. Comparison with three culture collection strains originally assigned to M. chthonoplastes revealed that strain PCC 7420 belongs to the same tightly delimited group, both phenotypically and in 16S rRNA gene sequence, but that strains SAG 3192 and 10mfx do not.

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Year:  1996        PMID: 8795218      PMCID: PMC168124          DOI: 10.1128/aem.62.9.3284-3291.1996

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  11 in total

1.  Methods for measuring and correcting the absorption spectrum of scattering suspensions.

Authors:  J AMESZ; L N DUYSENS; D C BRANDT
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2.  Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve) Gran.

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Journal:  Can J Microbiol       Date:  1962-04       Impact factor: 2.419

3.  Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing.

Authors:  T M Schmidt; E F DeLong; N R Pace
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

4.  Tangential flow filtration and preliminary phylogenetic analysis of marine picoplankton.

Authors:  S J Giovannoni; E F DeLong; T M Schmidt; N R Pace
Journal:  Appl Environ Microbiol       Date:  1990-08       Impact factor: 4.792

5.  Occurrence of UV-Absorbing, Mycosporine-Like Compounds among Cyanobacterial Isolates and an Estimate of Their Screening Capacity.

Authors:  F Garcia-Pichel; R W Castenholz
Journal:  Appl Environ Microbiol       Date:  1993-01       Impact factor: 4.792

Review 6.  Photosensory behavior in procaryotes.

Authors:  D P Häder
Journal:  Microbiol Rev       Date:  1987-03

7.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

Authors:  R K Saiki; D H Gelfand; S Stoffel; S J Scharf; R Higuchi; G T Horn; K B Mullis; H A Erlich
Journal:  Science       Date:  1988-01-29       Impact factor: 47.728

Review 8.  Isolation and purification of cyanobacteria.

Authors:  R Rippka
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

9.  An early origin of plastids within the cyanobacterial divergence is suggested by evolutionary trees based on complete 16S rRNA sequences.

Authors:  B Nelissen; Y Van de Peer; A Wilmotte; R De Wachter
Journal:  Mol Biol Evol       Date:  1995-11       Impact factor: 16.240

10.  Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments.

Authors:  G Muyzer; A Teske; C O Wirsen; H W Jannasch
Journal:  Arch Microbiol       Date:  1995-09       Impact factor: 2.552

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  32 in total

1.  Phylogenetic and morphological diversity of cyanobacteria in soil desert crusts from the Colorado plateau.

Authors:  F Garcia-Pichel; A López-Cortés; U Nübel
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

2.  Diversity of Salmonella strains isolated from the aquatic environment as determined by serotyping and amplification of the ribosomal DNA spacer regions.

Authors:  J Baudart; K Lemarchand; A Brisabois; P Lebaron
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3.  Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil.

Authors:  J C Cho; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  2000-12       Impact factor: 4.792

Review 4.  Search and discovery strategies for biotechnology: the paradigm shift.

Authors:  A T Bull; A C Ward; M Goodfellow
Journal:  Microbiol Mol Biol Rev       Date:  2000-09       Impact factor: 11.056

5.  Cyanobacterial diversity in natural and artificial microbial mats of Lake Fryxell (McMurdo Dry Valleys, Antarctica): a morphological and molecular approach.

Authors:  Arnaud Taton; Stana Grubisic; Evelyne Brambilla; Rutger De Wit; Annick Wilmotte
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

Review 6.  Prokaryote diversity and taxonomy: current status and future challenges.

Authors:  Aharon Oren
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-04-29       Impact factor: 6.237

7.  Biogeography, evolution, and diversity of epibionts in phototrophic consortia.

Authors:  Jens Glaeser; Jörg Overmann
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

8.  Increased species diversity and extended habitat range of sulfur-oxidizing Thiomicrospira spp.

Authors:  T Brinkhoff; G Muyzer
Journal:  Appl Environ Microbiol       Date:  1997-10       Impact factor: 4.792

9.  Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay.

Authors:  Luke C Burow; Dagmar Woebken; Brad M Bebout; Paul J McMurdie; Steven W Singer; Jennifer Pett-Ridge; Leslie Prufert-Bebout; Alfred M Spormann; Peter K Weber; Tori M Hoehler
Journal:  ISME J       Date:  2011-10-20       Impact factor: 10.302

10.  Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats.

Authors:  U Nübel; F Garcia-Pichel; M Kühl; G Muyzer
Journal:  Appl Environ Microbiol       Date:  1999-02       Impact factor: 4.792

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