Literature DB >> 8789257

HAM1, the gene controlling 6-N-hydroxylaminopurine sensitivity and mutagenesis in the yeast Saccharomyces cerevisiae.

V N Noskov1, K Staak, P V Shcherbakova, S G Kozmin, K Negishi, B C Ono, H Hayatsu, Y I Pavlov.   

Abstract

The ham1 mutant of yeast Saccharomyces cerevisiae is sensitive to the mutagenic and lethal effects of the base analog, 6-N-hydroxylaminopurine (HAP). We have isolated a clone from a centromere-plasmid-based genomic library complementing HAP sensitivity of the ham1 strain. After subcloning, a 3.4 kb functional fragment was sequenced. It contained three open reading frames (ORFs) corresponding to proteins 353, 197 and 184 amino acids long. LEU2+ disruptions of the promoter and N-terminal part of the gene coding 197 amino acids long protein led to moderate and strong sensitivity to HAP, respectively, and were allelic to the original ham1-1 mutation. Thus this ORF represents the HAM1 gene. The deduced amino acid sequence of HAM1 protein was not similar to any protein sequence of the SwissProt database. The HAM1 gene was localized on the right arm of chromosome X between cdc8 and cdc11. Spontaneous mutagenesis was not affected by the ham1::LEU2 disruption mutation.

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Year:  1996        PMID: 8789257     DOI: 10.1002/(SICI)1097-0061(199601)12:1%3C17::AID-YEA875%3E3.0.CO;2-I

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  26 in total

Review 1.  'Conserved hypothetical' proteins: prioritization of targets for experimental study.

Authors:  Michael Y Galperin; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2004-10-12       Impact factor: 16.971

2.  Functional study of the P32T ITPA variant associated with drug sensitivity in humans.

Authors:  Elena I Stepchenkova; Elena R Tarakhovskaya; Kathryn Spitler; Christin Frahm; Miriam R Menezes; Peter D Simone; Carol Kolar; Luis A Marky; Gloria E O Borgstahl; Youri I Pavlov
Journal:  J Mol Biol       Date:  2009-07-23       Impact factor: 5.469

Review 3.  Modulation of mutagenesis in eukaryotes by DNA replication fork dynamics and quality of nucleotide pools.

Authors:  Irina S-R Waisertreiger; Victoria G Liston; Miriam R Menezes; Hyun-Min Kim; Kirill S Lobachev; Elena I Stepchenkova; Tahir H Tahirov; Igor B Rogozin; Youri I Pavlov
Journal:  Environ Mol Mutagen       Date:  2012-10-10       Impact factor: 3.216

4.  Hypersensitivity of Escherichia coli Delta(uvrB-bio) mutants to 6-hydroxylaminopurine and other base analogs is due to a defect in molybdenum cofactor biosynthesis.

Authors:  S G Kozmin; Y I Pavlov; R L Dunn; R M Schaaper
Journal:  J Bacteriol       Date:  2000-06       Impact factor: 3.490

5.  Structure of the orthorhombic form of human inosine triphosphate pyrophosphatase.

Authors:  Jason Porta; Carol Kolar; Stanislav G Kozmin; Youri I Pavlov; Gloria E O Borgstahl
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-10-25

6.  Repair system for noncanonical purines in Escherichia coli.

Authors:  Nicholas E Burgis; Jason J Brucker; Richard P Cunningham
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

7.  Elevated Levels of DNA Strand Breaks Induced by a Base Analog in the Human Cell Line with the P32T ITPA Variant.

Authors:  Irina S-R Waisertreiger; Miriam R Menezes; James Randazzo; Youri I Pavlov
Journal:  J Nucleic Acids       Date:  2010-09-26

8.  Production of clastogenic DNA precursors by the nucleotide metabolism in Escherichia coli.

Authors:  Brian Budke; Andrei Kuzminov
Journal:  Mol Microbiol       Date:  2009-11-25       Impact factor: 3.501

9.  Cassava brown streak virus (Potyviridae) encodes a putative Maf/HAM1 pyrophosphatase implicated in reduction of mutations and a P1 proteinase that suppresses RNA silencing but contains no HC-Pro.

Authors:  Deusdedith R Mbanzibwa; Yanping Tian; Settumba B Mukasa; Jari P T Valkonen
Journal:  J Virol       Date:  2009-04-22       Impact factor: 5.103

10.  Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea.

Authors:  Yvan Zivanovic; Jean Armengaud; Arnaud Lagorce; Christophe Leplat; Philippe Guérin; Murielle Dutertre; Véronique Anthouard; Patrick Forterre; Patrick Wincker; Fabrice Confalonieri
Journal:  Genome Biol       Date:  2009-06-26       Impact factor: 13.583

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