Literature DB >> 8774905

RNA editing of larch mitochondrial tRNA(His) precursors is a prerequisite for processing.

L Maréchal-Drouard1, R Kumar, C Remacle, I Small.   

Abstract

Larch mitochondria contain a'native'tRNAHis which is absent from angiosperms. Sequence comparisons of genomic DNA and cDNA obtained from unprocessed primary transcripts of the larch mitochondrial gene trnH encoding this tRNA revealed three nucleotide discrepancies. These three nucleotide alterations, in the acceptor stem, D stem and anticodon stem respectively, are conversions of genomic cytidines to thymidines in the cDNA (uridines in the tRNA) and thus resemble the RNA editing events observed in nearly all plant mitochondrial mRNAs. Two cases of editing affecting mitochondrial tRNAs from angiosperms have already been described, but we present here the first example of such events in a gymnosperm mitochondrial tRNA. All three editing events correct mismatched C x A base pairs which appear when folding the gene sequence into the standard cloverleaf structure, thereby improving the secondary structure of the tRNA. When incubated with a heterologous potato mitochondrial processing extract, only the edited form of the larch mitochondrial tRNAHis precursor was efficiently processed in vitro. These data strongly suggest that editing of larch mitochondrial tRNAHis is a prerequisite for its processing.

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Year:  1996        PMID: 8774905      PMCID: PMC146066          DOI: 10.1093/nar/24.16.3229

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  37 in total

1.  Processing of transfer RNA precursors in a wheat mitochondrial extract.

Authors:  P J Hanic-Joyce; M W Gray
Journal:  J Biol Chem       Date:  1990-08-15       Impact factor: 5.157

2.  Differences in editing at homologous sites in messenger RNAs from angiosperm mitochondria.

Authors:  P S Covello; M W Gray
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

3.  In vitro processing of mitochondrial and plastid derived tRNA precursors in a plant mitochondrial extract.

Authors:  A Marchfelder; W Schuster; A Brennicke
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

4.  Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation.

Authors:  H Himeno; T Hasegawa; T Ueda; K Watanabe; K Miura; M Shimizu
Journal:  Nucleic Acids Res       Date:  1989-10-11       Impact factor: 16.971

5.  Detailed molecular model for transfer ribonucleic acid.

Authors:  M Levitt
Journal:  Nature       Date:  1969-11-22       Impact factor: 49.962

6.  The 5'-terminal guanylate of chloroplast histidine tRNA is encoded in its gene.

Authors:  U Burkard; D Söll
Journal:  J Biol Chem       Date:  1988-07-15       Impact factor: 5.157

Review 7.  RNA editing gives a new meaning to the genetic information in mitochondria and chloroplasts.

Authors:  D Pring; A Brennicke; W Schuster
Journal:  Plant Mol Biol       Date:  1993-03       Impact factor: 4.076

8.  The additional guanylate at the 5' terminus of Escherichia coli tRNAHis is the result of unusual processing by RNase P.

Authors:  O Orellana; L Cooley; D Söll
Journal:  Mol Cell Biol       Date:  1986-02       Impact factor: 4.272

9.  Post-transcriptional nucleotide addition is responsible for the formation of the 5' terminus of histidine tRNA.

Authors:  L Cooley; B Appel; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

10.  The CTAB-DNA precipitation method: a common mini-scale preparation of template DNA from phagemids, phages or plasmids suitable for sequencing.

Authors:  G Del Sal; G Manfioletti; C Schneider
Journal:  Biotechniques       Date:  1989-05       Impact factor: 1.993

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  25 in total

1.  Selective importation of RNA into isolated mitochondria from Leishmania tarentolae.

Authors:  M A Rubio; X Liu; H Yuzawa; J D Alfonzo; L Simpson
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

2.  RNA editing in hornwort chloroplasts makes more than half the genes functional.

Authors:  Masanori Kugita; Yuhei Yamamoto; Takeshi Fujikawa; Tohoru Matsumoto; Koichi Yoshinaga
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

Review 3.  Gene expression in plant mitochondria: transcriptional and post-transcriptional control.

Authors:  Stefan Binder; Axel Brennicke
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

4.  Increased accumulation of intron-containing transcripts in rice mitochondria caused by low temperature: is cold-sensitive RNA editing implicated?

Authors:  Shiho Kurihara-Yonemoto; Tomohiko Kubo
Journal:  Curr Genet       Date:  2010-09-28       Impact factor: 3.886

5.  Striking differences in mitochondrial tRNA import between different plant species.

Authors:  R Kumar; L Maréchal-Drouard; K Akama; I Small
Journal:  Mol Gen Genet       Date:  1996-09-25

6.  Plant cytosolic tRNAHis possesses an exceptional C54 in the canonical TPsiC loop.

Authors:  K Akama; Y Yukawa; M Sugiura; I Small
Journal:  Nucleic Acids Res       Date:  1998-06-01       Impact factor: 16.971

7.  RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs.

Authors:  P Giegé; A Brennicke
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

8.  Origin, evolution, and mechanism of 5' tRNA editing in chytridiomycete fungi.

Authors:  Marie-Josée Laforest; Charles E Bullerwell; Lise Forget; B Franz Lang
Journal:  RNA       Date:  2004-07-09       Impact factor: 4.942

9.  Genomic organization of eukaryotic tRNAs.

Authors:  Clara Bermudez-Santana; Camille Stephan-Otto Attolini; Toralf Kirsten; Jan Engelhardt; Sonja J Prohaska; Stephan Steigele; Peter F Stadler
Journal:  BMC Genomics       Date:  2010-04-28       Impact factor: 3.969

10.  Plant mitochondria use two pathways for the biogenesis of tRNAHis.

Authors:  Antonio Placido; François Sieber; Anthony Gobert; Raffaele Gallerani; Philippe Giegé; Laurence Maréchal-Drouard
Journal:  Nucleic Acids Res       Date:  2010-07-25       Impact factor: 16.971

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