Literature DB >> 8774854

A novel two-site binding equation presented in terms of the total ligand concentration.

Z X Wang1, R F Jiang.   

Abstract

For the most frequently used two-site model, an exact binding equation is presented in terms of the total ligand concentration. This equation has been extended to analyze the spectroscopic titration experiment where the dilution of protein solution cannot be neglected, the displacement study, and the effect of non-specific binding. Thus, with a non-linear regression program, all unknown binding parameters can be determined correctly by fitting these equations to the experimental data without any data transformation. As an example of the use of the new equations, the experimental data for receptor-insulin binding were taken from literature and reanalyzed by using a non-linear regression data analysis program.

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Year:  1996        PMID: 8774854     DOI: 10.1016/0014-5793(96)00818-6

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  21 in total

1.  Quantitative analysis of multisite protein-ligand interactions by NMR: binding of intrinsically disordered p53 transactivation subdomains with the TAZ2 domain of CBP.

Authors:  Munehito Arai; Josephine C Ferreon; Peter E Wright
Journal:  J Am Chem Soc       Date:  2012-02-15       Impact factor: 15.419

2.  Estimation of binding parameters for the protein-protein interaction using a site-directed spin labeling and EPR spectroscopy.

Authors:  Marcin Sarewicz; Sebastian Szytuła; Małgorzata Dutka; Artur Osyczka; Wojciech Froncisz
Journal:  Eur Biophys J       Date:  2007-11-30       Impact factor: 1.733

3.  Cooperative regulation of p53 by modulation of ternary complex formation with CBP/p300 and HDM2.

Authors:  Josephine C Ferreon; Chul Won Lee; Munehito Arai; Maria A Martinez-Yamout; H Jane Dyson; Peter E Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-08       Impact factor: 11.205

4.  Kinesin-14 family proteins HSET/XCTK2 control spindle length by cross-linking and sliding microtubules.

Authors:  Shang Cai; Lesley N Weaver; Stephanie C Ems-McClung; Claire E Walczak
Journal:  Mol Biol Cell       Date:  2008-12-30       Impact factor: 4.138

5.  Discovery of Potent 2-Aryl-6,7-dihydro-5 H-pyrrolo[1,2- a]imidazoles as WDR5-WIN-Site Inhibitors Using Fragment-Based Methods and Structure-Based Design.

Authors:  Feng Wang; Kyu Ok Jeon; James M Salovich; Jonathan D Macdonald; Joseph Alvarado; Rocco D Gogliotti; Jason Phan; Edward T Olejniczak; Qi Sun; Shidong Wang; DeMarco Camper; Joannes P Yuh; J Grace Shaw; Jiqing Sai; Olivia W Rossanese; William P Tansey; Shaun R Stauffer; Stephen W Fesik
Journal:  J Med Chem       Date:  2018-06-29       Impact factor: 7.446

Review 6.  Ligand binding assays at equilibrium: validation and interpretation.

Authors:  Edward C Hulme; Mike A Trevethick
Journal:  Br J Pharmacol       Date:  2010-11       Impact factor: 8.739

7.  Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design.

Authors:  Anders Friberg; Dominico Vigil; Bin Zhao; R Nathan Daniels; Jason P Burke; Pedro M Garcia-Barrantes; DeMarco Camper; Brian A Chauder; Taekyu Lee; Edward T Olejniczak; Stephen W Fesik
Journal:  J Med Chem       Date:  2012-12-17       Impact factor: 7.446

8.  Mapping the interactions of the p53 transactivation domain with the KIX domain of CBP.

Authors:  Chul Won Lee; Munehito Arai; Maria A Martinez-Yamout; H Jane Dyson; Peter E Wright
Journal:  Biochemistry       Date:  2009-03-17       Impact factor: 3.162

9.  One substrate, five products: reactions catalyzed by the dihydroneopterin aldolase from Mycobacterium tuberculosis.

Authors:  Clarissa M Czekster; John S Blanchard
Journal:  J Am Chem Soc       Date:  2012-11-26       Impact factor: 15.419

10.  An evaluation of a fluorometric method for determining binding parameters of drug-carrier complexes using mathematical models based on total drug concentration.

Authors:  Boontarika Chanvorachote; Ubonthip Nimmannit; Walaisiri Muangsiri; Lee Kirsch
Journal:  J Fluoresc       Date:  2009-04-08       Impact factor: 2.217

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