Literature DB >> 8770589

A UV-induced mutation in neurospora that affects translational regulation in response to arginine.

M Freitag1, N Dighde, M S Sachs.   

Abstract

The Neurospora crassa arg-2 gene encodes the small subunit of arginine-specific carbamoyl phosphate synthetase. The levels of arg-2 mRNA and mRNA translation are negatively regulated by arginine. An upstream open reading frame (uORF) in the transcript's 5' region has been implicated in arginine-specific control. An arg-2-hph fusion gene encoding hygromycin phosphotransferase conferred arginine-regulated resistance to hygromycin when introduced into N. crassa. We used an arg-2-hph strain to select for UV-induced mutants that grew in the presence of hygromycin and arginine, and we isolated 46 mutants that had either of two phenotypes. One phenotype indicated altered expression of both arg-2-hph and arg-2 genes; the other, altered expression of arg-2-hph but not arg-2. One of the latter mutations, which was genetically closely linked to arg-2-hph, was recovered from the 5' region of the arg-2-hph gene using PCR. Sequence analyses and transformation experiments revealed a mutation at uORF codon 12 (Asp to Asn) that abrogated negative regulation. Examination of the distribution of ribosomes on arg-2-hph transcripts showed that loss of regulation had a translational component, indicating the uORF sequence was important for Arg-specific translational control. Comparisons with other uORF5 suggest common elements in translational control mechanisms.

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Year:  1996        PMID: 8770589      PMCID: PMC1206940     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  44 in total

1.  Measurement of hygromycin B phosphotransferase activity in crude mammalian cell extracts by a simple dot-blot assay.

Authors:  M S Sørensen; M Duch; K Paludan; P Jørgensen; F S Pedersen
Journal:  Gene       Date:  1992-03-15       Impact factor: 3.688

2.  Peptidyl transferase inhibition by the nascent leader peptide of an inducible cat gene.

Authors:  Z Gu; E J Rogers; P S Lovett
Journal:  J Bacteriol       Date:  1993-09       Impact factor: 3.490

3.  Regulation of the carbamoylphosphate synthetase belonging to the arginine biosynthetic pathway of Saccharomyces cerevisiae.

Authors:  P Thuriaux; F Ramos; A Piérard; M Grenson; J M Wiame
Journal:  J Mol Biol       Date:  1972-06-20       Impact factor: 5.469

4.  Regulation of amino acid assimilation in a strain of Neurospora crassa lacking basic amino acid transport activity.

Authors:  W M Thwaites; L Pendyala
Journal:  Biochim Biophys Acta       Date:  1969-12-30

5.  Translational inhibition mediated by a short upstream open reading frame in the human cytomegalovirus gpUL4 (gp48) transcript.

Authors:  C R Degnin; M R Schleiss; J Cao; A P Geballe
Journal:  J Virol       Date:  1993-09       Impact factor: 5.103

6.  A mutation reducing feedback regulation by arginine in suppressed pyr-3 mutants in Neurospora.

Authors:  W M Thwaites
Journal:  Genetics       Date:  1967-04       Impact factor: 4.562

7.  Cell-specific translation of S-adenosylmethionine decarboxylase mRNA. Regulation by the 5' transcript leader.

Authors:  J R Hill; D R Morris
Journal:  J Biol Chem       Date:  1992-10-25       Impact factor: 5.157

8.  Pyrimidine-specific carbamyl phosphate synthetase in Neurospora crassa.

Authors:  L G Williams; R H Davis
Journal:  J Bacteriol       Date:  1970-08       Impact factor: 3.490

9.  Frameshift mutations in the v-src gene of avian sarcoma virus act in cis to specifically reduce v-src mRNA levels.

Authors:  S B Simpson; C M Stoltzfus
Journal:  Mol Cell Biol       Date:  1994-03       Impact factor: 4.272

10.  Inhibition of expression of the tryptophanase operon in Escherichia coli by extrachromosomal copies of the tna leader region.

Authors:  K Gish; C Yanofsky
Journal:  J Bacteriol       Date:  1993-06       Impact factor: 3.490

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  12 in total

1.  A nascent polypeptide domain that can regulate translation elongation.

Authors:  Peng Fang; Christina C Spevak; Cheng Wu; Matthew S Sachs
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-12       Impact factor: 11.205

Review 2.  Ribosome regulation by the nascent peptide.

Authors:  P S Lovett; E J Rogers
Journal:  Microbiol Rev       Date:  1996-06

3.  Role of the RepA1 protein in RepFIC plasmid replication.

Authors:  R Maas; C Wang
Journal:  J Bacteriol       Date:  1997-04       Impact factor: 3.490

4.  Ribosome stalling is responsible for arginine-specific translational attenuation in Neurospora crassa.

Authors:  Z Wang; M S Sachs
Journal:  Mol Cell Biol       Date:  1997-09       Impact factor: 4.272

Review 5.  Small open reading frames and cellular stress responses.

Authors:  Alexandra Khitun; Travis J Ness; Sarah A Slavoff
Journal:  Mol Omics       Date:  2019-02-27

6.  Expression of herpes virus thymidine kinase in Neurospora crassa.

Authors:  M S Sachs; E U Selker; B Lin; C J Roberts; Z Luo; D Vaught-Alexander; B S Margolin
Journal:  Nucleic Acids Res       Date:  1997-06-15       Impact factor: 16.971

7.  Arginine changes the conformation of the arginine attenuator peptide relative to the ribosome tunnel.

Authors:  Cheng Wu; Jiajie Wei; Pen-Jen Lin; Liwei Tu; Carol Deutsch; Arthur E Johnson; Matthew S Sachs
Journal:  J Mol Biol       Date:  2012-01-05       Impact factor: 5.469

Review 8.  Conserved Upstream Open Reading Frame Nascent Peptides That Control Translation.

Authors:  Thomas E Dever; Ivaylo P Ivanov; Matthew S Sachs
Journal:  Annu Rev Genet       Date:  2020-09-01       Impact factor: 16.830

9.  Sequence requirements for ribosome stalling by the arginine attenuator peptide.

Authors:  Christina C Spevak; Ivaylo P Ivanov; Matthew S Sachs
Journal:  J Biol Chem       Date:  2010-09-30       Impact factor: 5.157

10.  The evolutionarily conserved eukaryotic arginine attenuator peptide regulates the movement of ribosomes that have translated it.

Authors:  Z Wang; P Fang; M S Sachs
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

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