Literature DB >> 8770225

Structural determinants of fluoride and formate binding to hemoglobin and myoglobin: crystallographic and 1H-NMR relaxometric study.

S Aime1, M Fasano, S Paoletti, F Cutruzzolà, A Desideri, M Bolognesi, M Rizzi, P Ascenzi.   

Abstract

The x-ray crystal structure of the fluoride derivative of ferric sperm whale (Physeter catodon) myoglobin (Mb) has been determined at 2.5 A resolution (R = 0.187) by difference Fourier techniques. The fluoride anion, sitting in the central part of the heme distal site and coordinated to the heme iron, is hydrogen bonded to the distal His(64)E7 NE2 atom and to the W195 solvent water molecule. This water molecule also significantly interacts with the same HisE7 residue, which stabilizes the coordinated fluoride ion. Moreover, fluoride and formate binding to ferric Aplysia limacina Mb, sperm whale (Physeter catodon) Mb, horse (Caballus caballus) Mb, loggerhead sea turtle (Caretta caretta) Mb, and human hemoglobin has been investigated by 1H-NMR relaxometry. A strong solvent proton relaxation enhancement is observed for the fluoride derivatives of hemoproteins containing HisE7. Conversely, only a small outer-sphere contribution to the solvent relaxation rate has been observed for all of the formate derivatives considered and for the A. limacina Mb:fluoride derivative, where HisE7 is replaced by Val.

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Year:  1996        PMID: 8770225      PMCID: PMC1224947          DOI: 10.1016/S0006-3495(96)79593-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  20 in total

1.  Structure of fluoride methemoglobin.

Authors:  J F Deatherage; R S Loe; K Moffat
Journal:  J Mol Biol       Date:  1976-07-05       Impact factor: 5.469

2.  Structure of human fluoromethaemoglobin with inositol hexaphosphate.

Authors:  G Fermi; M F Perutz
Journal:  J Mol Biol       Date:  1977-08-15       Impact factor: 5.469

Review 3.  Regulation of oxygen affinity of hemoglobin: influence of structure of the globin on the heme iron.

Authors:  M F Perutz
Journal:  Annu Rev Biochem       Date:  1979       Impact factor: 23.643

4.  Determinants of a protein fold. Unique features of the globin amino acid sequences.

Authors:  D Bashford; C Chothia; A M Lesk
Journal:  J Mol Biol       Date:  1987-07-05       Impact factor: 5.469

5.  The mechanism of water proton nuclear magnetic resonance relaxation in the presence of mammalian and Aplysia metmyoglobin fluoride.

Authors:  M E Fabry; M Eisenstadt
Journal:  J Biol Chem       Date:  1974-05-10       Impact factor: 5.157

6.  Structure of myoglobin refined at 2-0 A resolution. I. Crystallographic refinement of metmyoglobin from sperm whale.

Authors:  T Takano
Journal:  J Mol Biol       Date:  1977-03-05       Impact factor: 5.469

7.  NMR relaxometric investigation on human methemoglobin and fluoromethemoglobin. An improved quantitative in vitro assay of human methemoglobin.

Authors:  S Aime; M Fasano; S Paoletti; A Arnelli; P Ascenzi
Journal:  Magn Reson Med       Date:  1995-06       Impact factor: 4.668

8.  Absence of water at the sixth co-ordination site in ferric Aplysia myoglobin.

Authors:  G M Giacometti; P Ascenzi; M Brunori; G Rigatti; G Giacometti; M Bolognesi
Journal:  J Mol Biol       Date:  1981-09-15       Impact factor: 5.469

9.  A proton magnetic relaxation study of ferric myoglobin and haemoglobin in water/ethanediol solutions.

Authors:  S Vuk-Pavlović; V Bracika; B Benko; S Maricić
Journal:  Biochim Biophys Acta       Date:  1977-04-25

10.  Interactions of solvent with the heme region of methemoglobin and fluoro-methemoglobin.

Authors:  S H Koenig; R D Brown; T R Lindstrom
Journal:  Biophys J       Date:  1981-06       Impact factor: 4.033

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  12 in total

1.  Interspin distances in spin-labeled metmyoglobin variants determined by saturation recovery EPR.

Authors:  Y Zhou; B E Bowler; K Lynch; S S Eaton; G R Eaton
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

2.  Angular dependence of dipole-dipole-Curie-spin cross-correlation effects in high-spin and low-spin paramagnetic myoglobin.

Authors:  Guido Pintacuda; Karin Hohenthanner; Gottfried Otting; Norbert Müller
Journal:  J Biomol NMR       Date:  2003-10       Impact factor: 2.835

3.  Role of the iron axial ligands of heme carrier HasA in heme uptake and release.

Authors:  Célia Caillet-Saguy; Mario Piccioli; Paola Turano; Gudrun Lukat-Rodgers; Nicolas Wolff; Kenton R Rodgers; Nadia Izadi-Pruneyre; Muriel Delepierre; Anne Lecroisey
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

4.  Modeling of the D1/D2 proteins and cofactors of the photosystem II reaction center: implications for herbicide and bicarbonate binding.

Authors:  J Xiong; S Subramaniam
Journal:  Protein Sci       Date:  1996-10       Impact factor: 6.725

5.  A self-assembled fluoride-water cyclic cluster of [F(H2O)]4(4-) in a molecular box.

Authors:  Md Alamgir Hossain; Musabbir A Saeed; Avijit Pramanik; Bryan M Wong; Syed A Haque; Douglas R Powell
Journal:  J Am Chem Soc       Date:  2012-07-13       Impact factor: 15.419

6.  Salt effects on ionization equilibria of histidines in myoglobin.

Authors:  Y H Kao; C A Fitch; S Bhattacharya; C J Sarkisian; J T Lecomte; B García-Moreno E
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

7.  Fluoride binding to characteristic heme-pocket centers: Insights into ligand stability.

Authors:  Kaitlyn Frankenfield; Darya Marchany-Rivera; Kayla G Flanders; Anthony Cruz-Balberdy; Juan Lopez-Garriga; Jose F Cerda
Journal:  J Inorg Biochem       Date:  2021-08-17       Impact factor: 4.155

8.  Binding and relaxometric properties of heme complexes with cyanogen bromide fragments of human serum albumin.

Authors:  Enrico Monzani; Maria Curto; Monica Galliano; Lorenzo Minchiotti; Silvio Aime; Simona Baroni; Mauro Fasano; Angela Amoresano; Anna Maria Salzano; Piero Pucci; Luigi Casella
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

9.  Ferric nitrosylated myoglobin catalyzes peroxynitrite scavenging.

Authors:  Paolo Ascenzi; Giovanna De Simone; Grazia R Tundo; Carlos Platas-Iglesias; Massimiliano Coletta
Journal:  J Biol Inorg Chem       Date:  2020-03-14       Impact factor: 3.358

10.  Reversible two-step unfolding of heme-human serum albumin: a (1)H-NMR relaxometric and circular dichroism study.

Authors:  Gabriella Fanali; Giampiero De Sanctis; Magda Gioia; Massimo Coletta; Paolo Ascenzi; Mauro Fasano
Journal:  J Biol Inorg Chem       Date:  2008-10-21       Impact factor: 3.358

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