Literature DB >> 8770202

Simplification and analysis of models of calcium dynamics based on IP3-sensitive calcium channel kinetics.

Y Tang1, J L Stephenson, H G Othmer.   

Abstract

We study the models for calcium (Ca) dynamics developed in earlier studies, in each of which the key component is the kinetics of intracellular inositol-1,4,5-trisphosphate-sensitive Ca channels. After rapidly equilibrating steps are eliminated, the channel kinetics in these models are represented by a single differential equation that is linear in the state of the channel. In the reduced kinetic model, the graph of the steady-state fraction of conducting channels as a function of log10(Ca) is a bell-shaped curve. Dynamically, a step increase in inositol-1,4,5-trisphosphate induces an incremental increase in the fraction of conducting channels, whereas a step increase in Ca can either potentiate or inhibit channel activation, depending on the Ca level before and after the increase. The relationships among these models are discussed, and experimental tests to distinguish between them are given. Under certain conditions the models for intracellular calcium dynamics are reduced to the singular perturbed form epsilon dx/d tau = f(x, y, p), dy/d tau = g(x, y, p). Phase-plane analysis is applied to a generic form of these simplified models to show how different types of Ca response, such as excitability, oscillations, and a sustained elevation of Ca, can arise. The generic model can also be used to study frequency encoding of hormonal stimuli, to determine the conditions for stable traveling Ca waves, and to understand the effect of channel properties on the wave speed.

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Year:  1996        PMID: 8770202      PMCID: PMC1224924          DOI: 10.1016/S0006-3495(96)79567-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  53 in total

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Journal:  J Theor Biol       Date:  1994-02-21       Impact factor: 2.691

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Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

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Journal:  Kidney Int       Date:  1993-04       Impact factor: 10.612

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Journal:  Nature       Date:  1989-05-25       Impact factor: 49.962

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  34 in total

1.  Impact of mitochondrial Ca2+ cycling on pattern formation and stability.

Authors:  M Falcke; J L Hudson; P Camacho; J D Lechleiter
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

2.  Sparks and puffs in oligodendrocyte progenitors: cross talk between ryanodine receptors and inositol trisphosphate receptors.

Authors:  L L Haak; L S Song; T F Molinski; I N Pessah; H Cheng; J T Russell
Journal:  J Neurosci       Date:  2001-06-01       Impact factor: 6.167

3.  Long-range signal transmission in autocrine relays.

Authors:  Michal Pribyl; Cyrill B Muratov; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

4.  Wave bifurcation and propagation failure in a model of Ca(2+) release.

Authors:  Y Timofeeva; S Coombes
Journal:  J Math Biol       Date:  2003-05-15       Impact factor: 2.259

5.  Mechanisms for temporal tuning and filtering by postsynaptic signaling pathways.

Authors:  Upinder S Bhalla
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

6.  Spatiotemporal organization of Ca dynamics: a modeling-based approach.

Authors:  Geneviève Dupont; Huguette Croisier
Journal:  HFSP J       Date:  2010-04-21

7.  Inositol 1,4,5-trisphosphate (InsP3) and calcium interact to increase the dynamic range of InsP3 receptor-dependent calcium signaling.

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Journal:  J Gen Physiol       Date:  1997-11       Impact factor: 4.086

8.  Modeling and analysis of calcium signaling events leading to long-term depression in cerebellar Purkinje cells.

Authors:  Nicholas Hernjak; Boris M Slepchenko; Kathleen Fernald; Charles C Fink; Dale Fortin; Ion I Moraru; James Watras; Leslie M Loew
Journal:  Biophys J       Date:  2005-09-16       Impact factor: 4.033

9.  Rapid ligand-regulated gating kinetics of single inositol 1,4,5-trisphosphate receptor Ca2+ release channels.

Authors:  Don-On Daniel Mak; John E Pearson; King Pan Campion Loong; Suman Datta; Marisabel Fernández-Mongil; J Kevin Foskett
Journal:  EMBO Rep       Date:  2007-10-12       Impact factor: 8.807

10.  Simulations of inositol phosphate metabolism and its interaction with InsP(3)-mediated calcium release.

Authors:  Jyoti Mishra; Upinder S Bhalla
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

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