Literature DB >> 8770189

A Monte Carlo simulation study of protein-induced heat capacity changes and lipid-induced protein clustering.

T Heimburg1, R L Biltonen.   

Abstract

Monte Carlo simulations were used to describe the interaction of peripheral and integral proteins with lipids in terms of heat capacity profiles and protein distribution. The simulations were based on a two-state model for the lipid, representing the lipid state as being either gel or fluid. The interaction between neighboring lipids has been taken into account through an unlike nearest neighbor free energy term delta omega, which is a measure of the cooperativity of the lipid transition. Lipid/protein interaction was considered using the experimental observation that the transition midpoints of lipid membranes are shifted upon protein binding, a thermodynamic consequence of different binding constants of protein with fluid or gel lipids. The difference of the binding free energies was used as an additional parameter to describe lipid-protein interaction. The heat capacity profiles of lipid/protein complexes could be well described for both peripheral and integral proteins. Binding of proteins results in a shift and an asymmetric broadening of the melting profile. The model results in a coexistence of gel and fluid lipid domains in the proximity of the thermotropic transition. As a consequence, bound peripheral proteins aggregate in the temperature range of the lipid transition. Integral proteins induce calorimetric melting curves that are qualitatively different from that of peripheral proteins and aggregate in either gel or liquid crystalline lipid phase. The results presented here are in good agreement with calorimetric experiments on lipid-protein complexes and have implementations for the functional control of proteins.

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Year:  1996        PMID: 8770189      PMCID: PMC1224911          DOI: 10.1016/S0006-3495(96)79551-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  52 in total

1.  Deformation free energy of bilayer membrane and its effect on gramicidin channel lifetime.

Authors:  H W Huang
Journal:  Biophys J       Date:  1986-12       Impact factor: 4.033

2.  Fluid phase connectivity in an isomorphous, two-component, two-phase phosphatidylcholine bilayer.

Authors:  W L Vaz; E C Melo; T E Thompson
Journal:  Biophys J       Date:  1990-07       Impact factor: 4.033

Review 3.  Theory of protein-induced lateral phase separation in lipid membranes.

Authors:  M M Sperotto; J H Ipsen; O G Mouritsen
Journal:  Cell Biophys       Date:  1989-02

4.  Interaction of protein kinase C with phosphatidylserine. 2. Specificity and regulation.

Authors:  J W Orr; A C Newton
Journal:  Biochemistry       Date:  1992-05-19       Impact factor: 3.162

5.  A microscopic model for lipid/protein bilayers with critical mixing.

Authors:  Z Zhang; M M Sperotto; M J Zuckermann; O G Mouritsen
Journal:  Biochim Biophys Acta       Date:  1993-04-08

6.  Effect of acyl chain length on the structure and motion of gramicidin A in lipid bilayers.

Authors:  B A Cornell; F Separovic; D E Thomas; A R Atkins; R Smith
Journal:  Biochim Biophys Acta       Date:  1989-10-16

7.  Noncooperative vs. cooperative reactivation of D-beta-hydroxybutyrate dehydrogenase: multiple equilibria for lecithin binding are determined by the physical state (soluble vs. bilayer) and composition of the phospholipids.

Authors:  J D Cortese; S Fleischer
Journal:  Biochemistry       Date:  1987-08-25       Impact factor: 3.162

8.  Lipid phase transition in planar bilayer membrane and its effect on carrier- and pore-mediated ion transport.

Authors:  G Boheim; W Hanke; H Eibl
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

9.  Alamethicin pyromellitate: an ion-activated channel-forming peptide.

Authors:  G A Woolley; R M Epand; I D Kerr; M S Sansom; B A Wallace
Journal:  Biochemistry       Date:  1994-06-07       Impact factor: 3.162

10.  Thermotropic behavior of dimyristoylphosphatidylglycerol and its interaction with cytochrome c.

Authors:  T Heimburg; R L Biltonen
Journal:  Biochemistry       Date:  1994-08-16       Impact factor: 3.162

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  21 in total

1.  Network formation of lipid membranes: triggering structural transitions by chain melting.

Authors:  M F Schneider; D Marsh; W Jahn; B Kloesgen; T Heimburg
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

2.  Relaxation kinetics of lipid membranes and its relation to the heat capacity.

Authors:  Peter Grabitz; Vesselka P Ivanova; Thomas Heimburg
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

3.  Segregation of photosystems in thylakoid membranes as a critical phenomenon.

Authors:  Igor Rojdestvenski; Alexander G Ivanov; M G Cottam; Andrei Borodich; Norman P A Huner; Gunnar Oquist
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

4.  Analyzing heat capacity profiles of peptide-containing membranes: cluster formation of gramicidin A.

Authors:  V P Ivanova; I M Makarov; T E Schäffer; T Heimburg
Journal:  Biophys J       Date:  2003-04       Impact factor: 4.033

5.  Lateral heterogeneity of photosystems in thylakoid membranes studied by Brownian dynamics simulations.

Authors:  Andrei Borodich; Igor Rojdestvenski; Michael Cottam
Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

6.  Diffusion in two-component lipid membranes--a fluorescence correlation spectroscopy and monte carlo simulation study.

Authors:  Agnieszka E Hac; Heiko M Seeger; Matthias Fidorra; Thomas Heimburg
Journal:  Biophys J       Date:  2004-10-22       Impact factor: 4.033

7.  Systematic derivation of partition functions for ligand binding to two-dimensional lattices.

Authors:  L Wang; E Di Cera
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-12       Impact factor: 11.205

8.  Resonance energy transfer in a model system of membranes: application to gel and liquid crystalline phases.

Authors:  L M Loura; A Fedorov; M Prieto
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

9.  Geometrical properties of gel and fluid clusters in DMPC/DSPC bilayers: Monte Carlo simulation approach using a two-state model.

Authors:  I P Sugár; E Michonova-Alexova; P L Chong
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

10.  Simulation of the gel-fluid transition in a membrane composed of lipids with two connected acyl chains: application of a dimer-move step.

Authors:  R Jerala; P F Almeida; R L Biltonen
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

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