Literature DB >> 8769310

Crystal structure of a caricain D158E mutant in complex with E-64.

N A Katerelos1, M A Taylor, M Scott, P W Goodenough, R W Pickersgill.   

Abstract

The structure of the D158E mutant of caricain (previously known as papaya protease omega) in complex with E-64 has been determined at 2.0 A resolution (overall R factor 19.3%). The structure reveals that the substituted glutamate makes the same pattern of hydrogen bonds as the aspartate in native caricain. This was not anticipated since in the native structure there is insufficient room to accommodate the glutamate side chain. The glutamate is accommodated in the mutant by a local expansion of the structure demonstrating that small structural changes are responsible for the change in activity.

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Year:  1996        PMID: 8769310     DOI: 10.1016/0014-5793(96)00697-7

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  7 in total

1.  Subclassification and biochemical analysis of plant papain-like cysteine proteases displays subfamily-specific characteristics.

Authors:  Kerstin H Richau; Farnusch Kaschani; Martijn Verdoes; Twinkal C Pansuriya; Sherry Niessen; Kurt Stüber; Tom Colby; Hermen S Overkleeft; Matthew Bogyo; Renier A L Van der Hoorn
Journal:  Plant Physiol       Date:  2012-02-27       Impact factor: 8.340

2.  Enzymatic and Structural Characterization of the Major Endopeptidase in the Venus Flytrap Digestion Fluid.

Authors:  Michael W Risør; Line R Thomsen; Kristian W Sanggaard; Tania A Nielsen; Ida B Thøgersen; Marie V Lukassen; Litten Rossen; Irene Garcia-Ferrer; Tibisay Guevara; Carsten Scavenius; Ernst Meinjohanns; F Xavier Gomis-Rüth; Jan J Enghild
Journal:  J Biol Chem       Date:  2015-12-01       Impact factor: 5.157

3.  Purification, crystallization and preliminary X-ray analysis of CMS1MS2: a cysteine proteinase from Carica candamarcensis latex.

Authors:  Marco Túlio Ribeiro Gomes; Raphael Dias Teixeira; Henrique de Assis Lopes Ribeiro; Andréia Pereira Turchetti; Caroline Furtado Junqueira; Míriam Tereza Paz Lopes; Carlos Edmundo Salas; Ronaldo Alves Pinto Nagem
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-05-16

4.  Preparation and characterization of a truncated caricain lacking 41 residues from the N-terminal.

Authors:  Wei Liu; Wanhui Ye; Zhangming Wang; Honglin Chao; Juyu Lian
Journal:  Protein J       Date:  2005-05       Impact factor: 2.371

5.  Conserved water-mediated H-bonding dynamics of catalytic His159 and Asp158: insight into a possible acid-base coupled mechanism in plant thiol protease.

Authors:  Tapas K Nandi; Hridoy R Bairagya; Bishnu P Mukhopadhyay; Payel Mallik; Dipankar Sukul; Asim K Bera
Journal:  J Mol Model       Date:  2011-11-09       Impact factor: 1.810

6.  Conserved water-mediated H-bonding dynamics of catalytic Asn 175 in plant thiol protease.

Authors:  Tapas K Nandi; Hridoy R Bairagya; Bishnu P Mukhopadhyay; K Sekar; Dipankar Sukul; Asim K Bera
Journal:  J Biosci       Date:  2009-03       Impact factor: 1.826

7.  Insight to structural subsite recognition in plant thiol protease-inhibitor complexes : understanding the basis of differential inhibition and the role of water.

Authors:  S Bhattacharya; S Ghosh; S Chakraborty; A K Bera; B P Mukhopadhayay; I Dey; A Banerjee
Journal:  BMC Struct Biol       Date:  2001-09-11
  7 in total

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