Literature DB >> 8752329

Effects of lysine-to-glycine mutations in the ATP-binding consensus sequences in the AddA and AddB subunits on the Bacillus subtilis AddAB enzyme activities.

B J Haijema1, R Meima, J Kooistra, G Venema.   

Abstract

The N-terminal regions of both subunits AddA and AddB of the Bacillus subtilis AddAB enzyme contain amino acid sequences, designated motif I, which are commonly found in ATP-binding enzymes. The functional significance of the motif I regions was studied by replacing the highly conserved lysine residues of the regions in both subunits by glycines and by examination of the resulting mutant enzymes with respect to their enzymatic properties. This study shows that the mutation in subunit AddB hardly affected the ATPase, helicase, and exonuclease activities of the AddAB enzyme. However, the mutation in subunit AddA drastically reduced these activities, as well as the kcat for ATP hydrolysis. The apparent Km for ATP in ATP hydrolysis did not significantly deviate from that of the wild-type enzyme. These results suggest that the lysine residue in motif I of subunit AddA of the AddAB enzyme is not essential for the binding of the nucleotide but has a role in ATP hydrolysis, which is required for the exonuclease and helicase activities of the enzyme.

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Year:  1996        PMID: 8752329      PMCID: PMC178308          DOI: 10.1128/jb.178.17.5130-5137.1996

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  41 in total

1.  Cloning, sequencing, and expression of Bacillus subtilis genes involved in ATP-dependent nuclease synthesis.

Authors:  J Kooistra; G Venema
Journal:  J Bacteriol       Date:  1991-06       Impact factor: 3.490

2.  Substrate specificity of the DNA unwinding activity of the RecBC enzyme of Escherichia coli.

Authors:  A F Taylor; G R Smith
Journal:  J Mol Biol       Date:  1985-09-20       Impact factor: 5.469

3.  Host/vector interactions which affect the viability of recombinant phage lambda clones.

Authors:  K F Wertman; A R Wyman; D Botstein
Journal:  Gene       Date:  1986       Impact factor: 3.688

4.  Physical properties of the DNA of bacteriophage SP50.

Authors:  N Biswal; A K Kleinschmidt; H C Spatz; T A Trautner
Journal:  Mol Gen Genet       Date:  1967

5.  The pMTL nic- cloning vectors. I. Improved pUC polylinker regions to facilitate the use of sonicated DNA for nucleotide sequencing.

Authors:  S P Chambers; S E Prior; D A Barstow; N P Minton
Journal:  Gene       Date:  1988-08-15       Impact factor: 3.688

6.  Rapid and efficient cosmid cloning.

Authors:  D Ish-Horowicz; J F Burke
Journal:  Nucleic Acids Res       Date:  1981-07-10       Impact factor: 16.971

7.  The nucleotide sequence of the uvrD gene of E. coli.

Authors:  P W Finch; P T Emmerson
Journal:  Nucleic Acids Res       Date:  1984-07-25       Impact factor: 16.971

8.  ATP-binding site of adenylate kinase: mechanistic implications of its homology with ras-encoded p21, F1-ATPase, and other nucleotide-binding proteins.

Authors:  D C Fry; S A Kuby; A S Mildvan
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

9.  Characterization of Bacillus subtilis recombinational pathways.

Authors:  J C Alonso; G Lüder; R H Tailor
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

10.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

Authors:  J E Walker; M Saraste; M J Runswick; N J Gay
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  11 in total

1.  The recombination genes addAB are not restricted to gram-positive bacteria: genetic analysis of the recombination initiation enzymes RecF and AddAB in Rhizobium etli.

Authors:  Jacobo Zuñiga-Castillo; David Romero; Jaime M Martínez-Salazar
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

2.  AdnAB: a new DSB-resecting motor-nuclease from mycobacteria.

Authors:  Krishna Murari Sinha; Mihaela-Carmen Unciuleac; Michael S Glickman; Stewart Shuman
Journal:  Genes Dev       Date:  2009-05-26       Impact factor: 11.361

3.  Characterization of the mycobacterial AdnAB DNA motor provides insights into the evolution of bacterial motor-nuclease machines.

Authors:  Mihaela-Carmen Unciuleac; Stewart Shuman
Journal:  J Biol Chem       Date:  2009-11-17       Impact factor: 5.157

4.  Role of enzymes of homologous recombination in illegitimate plasmid recombination in Bacillus subtilis.

Authors:  R Meima; B J Haijema; H Dijkstra; G J Haan; G Venema; S Bron
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

5.  Small-molecule inhibitors of bacterial AddAB and RecBCD helicase-nuclease DNA repair enzymes.

Authors:  Susan K Amundsen; Timothy Spicer; Ahmet C Karabulut; Luz Marina Londoño; Christina Eberhart; Virneliz Fernandez Vega; Thomas D Bannister; Peter Hodder; Gerald R Smith
Journal:  ACS Chem Biol       Date:  2012-03-23       Impact factor: 5.100

6.  Double strand break unwinding and resection by the mycobacterial helicase-nuclease AdnAB in the presence of single strand DNA-binding protein (SSB).

Authors:  Mihaela-Carmen Unciuleac; Stewart Shuman
Journal:  J Biol Chem       Date:  2010-08-23       Impact factor: 5.157

Review 7.  DNA repair and genome maintenance in Bacillus subtilis.

Authors:  Justin S Lenhart; Jeremy W Schroeder; Brian W Walsh; Lyle A Simmons
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

8.  Identification of the lactococcal exonuclease/recombinase and its modulation by the putative Chi sequence.

Authors:  M el Karoui; D Ehrlich; A Gruss
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-20       Impact factor: 11.205

9.  Dual nuclease and helicase activities of Helicobacter pylori AddAB are required for DNA repair, recombination, and mouse infectivity.

Authors:  Susan K Amundsen; Jutta Fero; Nina R Salama; Gerald R Smith
Journal:  J Biol Chem       Date:  2009-04-24       Impact factor: 5.157

10.  The adnAB locus, encoding a putative helicase-nuclease activity, is essential in Streptomyces.

Authors:  Lingli Zhang; Hoang Chuong Nguyen; Ludovic Chipot; Emilie Piotrowski; Claire Bertrand; Annabelle Thibessard; Pierre Leblond
Journal:  J Bacteriol       Date:  2014-05-16       Impact factor: 3.490

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