Literature DB >> 8744775

FastAlert--an automatic search system to alert about new entries in biological sequence databanks.

F Eggenberger1, N Redaschi, R Doelz.   

Abstract

This paper describes a new tool enabling awareness of new sequence databank entries of interest. The FastAlert system relieves the researcher from the burden of repeating FASTA searches in order to keep up with the rapidly growing amount of information found in biological sequence databanks. The query sequence can be submitted from any computer connected to the Internet. Upon registration, the databank, including the updates, is scanned at periodic intervals with the sequence provided. The results, so-called FastAlert reports, are delivered via electronic mail. The reports contain the FASTA best-scores list and the similarity statistics for each entry listed.

Mesh:

Year:  1996        PMID: 8744775     DOI: 10.1093/bioinformatics/12.2.129

Source DB:  PubMed          Journal:  Comput Appl Biosci        ISSN: 0266-7061


  1 in total

1.  PDBalert: automatic, recurrent remote homology tracking and protein structure prediction.

Authors:  Vatsal Agarwal; Michael Remmert; Andreas Biegert; Johannes Söding
Journal:  BMC Struct Biol       Date:  2008-11-25
  1 in total

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