Literature DB >> 8743994

A new approach using multiplex long accurate PCR and yeast artificial chromosomes for bacterial chromosome mapping and sequencing.

A Sorokin1, A Lapidus, V Capuano, N Galleron, P Pujic, S D Ehrlich.   

Abstract

An efficient approach for structural studies on bacterial chromosomes is presented. It is based on high-resolution PCR map construction by using a multiplex long accurate PCR (MLA PCR) protocol and a YAC clone carrying the region to be mapped as indicator. The high-resolution PCR map of the bacillus subtilis rrnB-dnaB region is presented as an example. Data are also presented on the use of DNA generated by LA PCR for sequencing; they are relevant to LA PCR induced mutations and justify the application of such mapping for sequencing long stretches of bacterial chromosomes.

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Year:  1996        PMID: 8743994     DOI: 10.1101/gr.6.5.448

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  10 in total

Review 1.  Search and discovery strategies for biotechnology: the paradigm shift.

Authors:  A T Bull; A C Ward; M Goodfellow
Journal:  Microbiol Mol Biol Rev       Date:  2000-09       Impact factor: 11.056

2.  Complete genome sequence of Lactococcus lactis subsp. cremoris A76.

Authors:  Alexander Bolotin; Benoit Quinquis; Stanislas Dusko Ehrlich; Alexei Sorokin
Journal:  J Bacteriol       Date:  2012-03       Impact factor: 3.490

3.  Complete genome sequence of the highly hemolytic strain Bacillus cereus F837/76.

Authors:  Sandrine Auger; Nathalie Galleron; Béatrice Ségurens; Carole Dossat; Alexander Bolotin; Patrick Wincker; Alexei Sorokin
Journal:  J Bacteriol       Date:  2012-03       Impact factor: 3.490

4.  The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution.

Authors:  M van de Guchte; S Penaud; C Grimaldi; V Barbe; K Bryson; P Nicolas; C Robert; S Oztas; S Mangenot; A Couloux; V Loux; R Dervyn; R Bossy; A Bolotin; J-M Batto; T Walunas; J-F Gibrat; P Bessières; J Weissenbach; S D Ehrlich; E Maguin
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-05       Impact factor: 11.205

5.  Complete genome sequence of the commensal Streptococcus salivarius strain JIM8777.

Authors:  Eric Guédon; Christine Delorme; Nicolas Pons; Corinne Cruaud; Valentin Loux; Arnaud Couloux; Céline Gautier; Nicolas Sanchez; Séverine Layec; Nathalie Galleron; Mathieu Almeida; Maarten van de Guchte; Sean P Kennedy; S Dusko Ehrlich; Jean-François Gibrat; Patrick Wincker; Pierre Renault
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

6.  Complete genome sequence of the clinical Streptococcus salivarius strain CCHSS3.

Authors:  Christine Delorme; Eric Guédon; Nicolas Pons; Corinne Cruaud; Arnaud Couloux; Valentin Loux; Hélène Chiapello; Claire Poyart; Céline Gautier; Nicolas Sanchez; Mathieu Almeida; Sean P Kennedy; S Dusko Ehrlich; Jean-François Gibrat; Patrick Wincker; Pierre Renault
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

7.  Identification of the lactococcal exonuclease/recombinase and its modulation by the putative Chi sequence.

Authors:  M el Karoui; D Ehrlich; A Gruss
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-20       Impact factor: 11.205

8.  The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403.

Authors:  A Bolotin; P Wincker; S Mauger; O Jaillon; K Malarme; J Weissenbach; S D Ehrlich; A Sorokin
Journal:  Genome Res       Date:  2001-05       Impact factor: 9.043

9.  De Novo Whole-Genome Sequence of Micromonospora carbonacea JXNU-1 with Broad-Spectrum Antimicrobial Activity, Isolated from Soil Samples.

Authors:  Yun Jiang; Yun-Hong Huang; Zhong-Er Long
Journal:  Genome Announc       Date:  2015-04-09

10.  Genome Sequence of Lactobacillus delbrueckii subsp. lactis CNRZ327, a Dairy Bacterium with Anti-Inflammatory Properties.

Authors:  Hela El Kafsi; Johan Binesse; Valentin Loux; Julien Buratti; Samira Boudebbouze; Rozenn Dervyn; Amal Hammani; Emmanuelle Maguin; Maarten van de Guchte
Journal:  Genome Announc       Date:  2014-07-17
  10 in total

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