Literature DB >> 8743686

Identification of sequence pattern with profile analysis.

M Gribskov1, S Veretnik.   

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Year:  1996        PMID: 8743686     DOI: 10.1016/s0076-6879(96)66015-7

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


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  18 in total

1.  The complement of protein phosphatase catalytic subunits encoded in the genome of Arabidopsis.

Authors:  David Kerk; Joshua Bulgrien; Douglas W Smith; Brooke Barsam; Stella Veretnik; Michael Gribskov
Journal:  Plant Physiol       Date:  2002-06       Impact factor: 8.340

2.  Embedding strategies for effective use of information from multiple sequence alignments.

Authors:  S Henikoff; J G Henikoff
Journal:  Protein Sci       Date:  1997-03       Impact factor: 6.725

3.  The phage N4 virion RNA polymerase catalytic domain is related to single-subunit RNA polymerases.

Authors:  K M Kazmierczak; E K Davydova; A A Mustaev; L B Rothman-Denes
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

4.  Highly specific protein sequence motifs for genome analysis.

Authors:  C G Nevill-Manning; T D Wu; D L Brutlag
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

5.  Extracting protein alignment models from the sequence database.

Authors:  A F Neuwald; J S Liu; D J Lipman; C E Lawrence
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

6.  Arabidopsis proteins containing similarity to the universal stress protein domain of bacteria.

Authors:  David Kerk; Joshua Bulgrien; Douglas W Smith; Michael Gribskov
Journal:  Plant Physiol       Date:  2003-03       Impact factor: 8.340

7.  iSPOT: A web tool to infer the interaction specificity of families of protein modules.

Authors:  Barbara Brannetti; Manuela Helmer-Citterich
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

8.  Local combinational variables: an approach used in DNA-binding helix-turn-helix motif prediction with sequence information.

Authors:  Wenwei Xiong; Tonghua Li; Kai Chen; Kailin Tang
Journal:  Nucleic Acids Res       Date:  2009-08-03       Impact factor: 16.971

9.  Variable structure motifs for transcription factor binding sites.

Authors:  John E Reid; Kenneth J Evans; Nigel Dyer; Lorenz Wernisch; Sascha Ott
Journal:  BMC Genomics       Date:  2010-01-14       Impact factor: 3.969

10.  The Arabidopsis CDPK-SnRK superfamily of protein kinases.

Authors:  Estelle M Hrabak; Catherine W M Chan; Michael Gribskov; Jeffrey F Harper; Jung H Choi; Nigel Halford; Jorg Kudla; Sheng Luan; Hugh G Nimmo; Michael R Sussman; Martine Thomas; Kay Walker-Simmons; Jian-Kang Zhu; Alice C Harmon
Journal:  Plant Physiol       Date:  2003-06       Impact factor: 8.340

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