Literature DB >> 8740181

A World Wide Web (WWW) server database engine for an organelle database, MitoDat.

P F Lemkin1, M Chipperfield, C Merril, S Zullo.   

Abstract

We describe a simple database search engine "dbEngine" which may be used to quickly create a searchable database on a World Wide Web (WWW) server. Data may be prepared from spreadsheet programs (such as Excel, etc.) or from tables exported from relationship database systems. This Common Gateway Interface (CGI-BIN) program is used with a WWW server such as available commercially, or from National Center for Supercomputer Algorithms (NCSA) or CERN. Its capabilities include: (i) searching records by combinations of terms connected with ANDs or ORs; (ii) returning search results as hypertext links to other WWW database servers; (iii) mapping lists of literature reference identifiers to the full references; (iv) creating bidirectional hypertext links between pictures and the database. DbEngine has been used to support the MitoDat database (Mendelian and non-Mendelian inheritance associated with the Mitochondrion) on the WWW.

Entities:  

Mesh:

Year:  1996        PMID: 8740181     DOI: 10.1002/elps.1150170327

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  7 in total

1.  GOBASE: the organelle genome database.

Authors:  N Shimko; L Liu; B F Lang; G Burger
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

2.  MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002.

Authors:  Marcella Attimonelli; Domenico Catalano; Carmela Gissi; Giorgio Grillo; Flavio Licciulli; Sabino Liuni; Monica Santamaria; Graziano Pesole; Cecilia Saccone
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

Review 3.  Towards precision medicine: advances in computational approaches for the analysis of human variants.

Authors:  Thomas A Peterson; Emily Doughty; Maricel G Kann
Journal:  J Mol Biol       Date:  2013-08-17       Impact factor: 5.469

4.  MitoGenesisDB: an expression data mining tool to explore spatio-temporal dynamics of mitochondrial biogenesis.

Authors:  Jean-Christophe Gelly; Mickael Orgeur; Claude Jacq; Gaëlle Lelandais
Journal:  Nucleic Acids Res       Date:  2010-09-09       Impact factor: 16.971

Review 5.  The past, present and future of mitochondrial genomics: have we sequenced enough mtDNAs?

Authors:  David Roy Smith
Journal:  Brief Funct Genomics       Date:  2015-06-27       Impact factor: 4.241

6.  PDbase: a database of Parkinson's disease-related genes and genetic variation using substantia nigra ESTs.

Authors:  Jin Ok Yang; Woo-Yeon Kim; So-Young Jeong; Jung-Hwa Oh; Sungwoong Jho; Jong Bhak; Nam-Soon Kim
Journal:  BMC Genomics       Date:  2009-12-03       Impact factor: 3.969

7.  An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases.

Authors:  Jin Ok Yang; Sohyun Hwang; Jeongsu Oh; Jong Bhak; Tae-Kwon Sohn
Journal:  BMC Bioinformatics       Date:  2008-12-12       Impact factor: 3.169

  7 in total

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