Literature DB >> 8727925

Polymorphism in Brucella strains detected by studying distribution of two short repetitive DNA elements.

E Mercier1, E Jumas-Bilak, A Allardet-Servent, D O'Callaghan, M Ramuz.   

Abstract

Thirty-four Brucella reference or field strains representing all the species and biovars were studied by repetitive element sequence-based PCR, a PCR using primers complementary to two enterobacterial short repetitive sequences: repetitive extragenic palindromic and enterobacterial repetitive intergenic consensus sequences. All the stains showed a positive amplification, suggesting that the Brucella genome contains such sequences. Repetitive extragenic palindromic PCR was less discriminating than enterobacterial repetitive intergenic consensus PCR in terms of distinguishing strains, but a combination of the two methods was able to distinguish all the isolates, except for some strains belonging to biovars 3 and 9 of Brucella abortus. Repetitive element sequence-based PCR appears to be a simple and useful method for the study of brucellosis epidemiology.

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Year:  1996        PMID: 8727925      PMCID: PMC229004          DOI: 10.1128/jcm.34.5.1299-1302.1996

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  18 in total

Review 1.  Short, interspersed repetitive DNA sequences in prokaryotic genomes.

Authors:  J R Lupski; G M Weinstock
Journal:  J Bacteriol       Date:  1992-07       Impact factor: 3.490

2.  Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergeneric consensus) sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria.

Authors:  F J de Bruijn
Journal:  Appl Environ Microbiol       Date:  1992-07       Impact factor: 4.792

3.  ERIC sequences: a novel family of repetitive elements in the genomes of Escherichia coli, Salmonella typhimurium and other enterobacteria.

Authors:  C S Hulton; C F Higgins; P M Sharp
Journal:  Mol Microbiol       Date:  1991-04       Impact factor: 3.501

4.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

5.  Use of low-frequency-cleavage restriction endonucleases for DNA analysis in epidemiological investigations of nosocomial bacterial infections.

Authors:  A Allardet-Servent; N Bouziges; M J Carles-Nurit; G Bourg; A Gouby; M Ramuz
Journal:  J Clin Microbiol       Date:  1989-09       Impact factor: 5.948

6.  DNA polymorphism in strains of the genus Brucella.

Authors:  A Allardet-Servent; G Bourg; M Ramuz; M Pages; M Bellis; G Roizes
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

7.  Characterization and occurrence of two repeated palindromic DNA elements of Brucella spp.: Bru-RS1 and Bru-RS2.

Authors:  S M Halling; B J Bricker
Journal:  Mol Microbiol       Date:  1994-11       Impact factor: 3.501

8.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

9.  Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes.

Authors:  J Versalovic; T Koeuth; J R Lupski
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

10.  A family of dispersed repetitive extragenic palindromic DNA sequences in E. coli.

Authors:  E Gilson; J M Clément; D Brutlag; M Hofnung
Journal:  EMBO J       Date:  1984-06       Impact factor: 11.598

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  9 in total

1.  An IS711 element downstream of the bp26 gene is a specific marker of Brucella spp. isolated from marine mammals.

Authors:  A Cloeckaert; M Grayon; O Grepinet
Journal:  Clin Diagn Lab Immunol       Date:  2000-09

2.  Pseudomonas aeruginosa and Achromobacter sp. clonal selection leads to successive waves of contamination of water in dental care units.

Authors:  Fatima Abdouchakour; Chloé Dupont; Delphine Grau; Fabien Aujoulat; Patricia Mournetas; Hélène Marchandin; Sylvie Parer; Philippe Gibert; Jean Valcarcel; Estelle Jumas-Bilak
Journal:  Appl Environ Microbiol       Date:  2015-08-21       Impact factor: 4.792

3.  Molecular characterization of a Brucella species large DNA fragment deleted in Brucella abortus strains: evidence for a locus involved in the synthesis of a polysaccharide.

Authors:  N Vizcaíno; A Cloeckaert; M S Zygmunt; L Fernández-Lago
Journal:  Infect Immun       Date:  1999-06       Impact factor: 3.441

4.  Evaluation of a multilocus variable-number tandem-repeat analysis scheme for typing human Brucella isolates in a region of brucellosis endemicity.

Authors:  Mireille M Kattar; Rola F Jaafar; George F Araj; Philippe Le Flèche; Ghassan M Matar; Roland Abi Rached; Simon Khalife; Gilles Vergnaud
Journal:  J Clin Microbiol       Date:  2008-10-15       Impact factor: 5.948

5.  Implications of molecular genotyping of Helicobacter pylori isolates from different human populations by genomic fingerprinting of enterobacterial repetitive intergenic consensus regions for strain identification and geographic evolution.

Authors:  M Abid Hussain; Farhana Kauser; Aleem A Khan; Santosh Tiwari; Chittoor M Habibullah; Niyaz Ahmed
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

6.  Comparative diffusion assay to assess efficacy of topical antimicrobial agents against Pseudomonas aeruginosa in burns care.

Authors:  Fabien Aujoulat; Françoise Lebreton; Sara Romano; Milena Delage; Hélène Marchandin; Monique Brabet; Françoise Bricard; Sylvain Godreuil; Sylvie Parer; Estelle Jumas-Bilak
Journal:  Ann Clin Microbiol Antimicrob       Date:  2011-06-24       Impact factor: 3.944

7.  Species identification and molecular typing of human Brucella isolates from Kuwait.

Authors:  Abu S Mustafa; Nazima Habibi; Amr Osman; Faraz Shaheed; Mohd W Khan
Journal:  PLoS One       Date:  2017-08-11       Impact factor: 3.240

8.  Differentiation of Brucella abortus and B. melitensis biovars using PCR-RFLP and REP-PCR.

Authors:  M Amoupour; F Nezamzadeh; A Z Bialvaei; M Sedighi; F M Jazi; M Y Alikhani; R Mirnejad
Journal:  New Microbes New Infect       Date:  2019-08-22

9.  Brucella 'HOOF-Prints': strain typing by multi-locus analysis of variable number tandem repeats (VNTRs).

Authors:  Betsy J Bricker; Darla R Ewalt; Shirley M Halling
Journal:  BMC Microbiol       Date:  2003-07-11       Impact factor: 3.605

  9 in total

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