Literature DB >> 8710508

The complete nucleotide sequence of bacteriophage HP1 DNA.

D Esposito1, W P Fitzmaurice, R C Benjamin, S D Goodman, A S Waldman, J J Scocca.   

Abstract

The complete nucleotide sequence of the temperate phage HP1 of Haemophilus influenzae was determined. The phage contains a linear, double-stranded genome of 32 355 nt with cohesive termini. Statistical methods were used to identify 41 probable protein coding segments organized into five plausible transcriptional units. Regions encoding proteins involved in recombination, replication, transcriptional control, host cell lysis and phage production were identified. The sizes of proteins in the mature HP1 particle were determined to assist in identifying genes for structural proteins. Similarities between HP1 coding sequences and those in databases, as well as similar gene organizations and control mechanisms, suggest that HP1 is a member of the P2-like phage family, with strong similarities to coliphages P2 and 186 and some similarity to the retronphage Ec67.

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Year:  1996        PMID： 8710508      PMCID： PMC145952          DOI： 10.1093/nar/24.12.2360

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  46 in total

1.  Control of gene expression in the temperate coliphage 186. X. The cI repressor directly represses transcription of the late control gene B.

Authors:  J A Dibbens; S L Gregory; J B Egan
Journal:  Mol Microbiol       Date:  1992-09       Impact factor: 3.501

2.  INFECTION OF TRANSFORMABLE CELLS OF HAEMOPHILUS INFLUENZAE BY BACTERIOPHAGE AND BACTERIOPHAGE DNA.

Authors:  W HARM; C S RUPERT
Journal:  Z Vererbungsl       Date:  1963-12-30

Review 3.  Regulatory sequences involved in the promotion and termination of RNA transcription.

Authors:  M Rosenberg; D Court
Journal:  Annu Rev Genet       Date:  1979       Impact factor: 16.830

4.  Nucleotide sequence of cloned DNA segments of the Haemophilus influenzae bacteriophage HP1c1.

Authors:  R C Benjamin; W P Fitzmaurice; P C Huang; J J Scocca
Journal:  Gene       Date:  1984-11       Impact factor: 3.688

5.  The fidelity of Taq polymerase catalyzing PCR is improved by an N-terminal deletion.

Authors:  W M Barnes
Journal:  Gene       Date:  1992-03-01       Impact factor: 3.688

6.  Primary structure of a DNA (N6-adenine)-methyltransferase from Escherichia coli virus T1. DNA sequence, genomic organization, and comparative analysis.

Authors:  E Schneider-Scherzer; B Auer; E J de Groot; M Schweiger
Journal:  J Biol Chem       Date:  1990-04-15       Impact factor: 5.157

7.  Nucleotide sequence and expression of the gene for the site-specific integration protein from bacteriophage HP1 of Haemophilus influenzae.

Authors:  S D Goodman; J J Scocca
Journal:  J Bacteriol       Date:  1989-08       Impact factor: 3.490

8.  Functions involved in bacteriophage P2-induced host cell lysis and identification of a new tail gene.

Authors:  R Ziermann; B Bartlett; R Calendar; G E Christie
Journal:  J Bacteriol       Date:  1994-08       Impact factor: 3.490

9.  Studies of bacteriophage P2 DNA replication: localization of the cleavage site of the A protein.

Authors:  Y Liu; E Haggård-Ljungquist
Journal:  Nucleic Acids Res       Date:  1994-12-11       Impact factor: 16.971

10.  Bacteriophage of Haemophilus influenzae. 3. Morphology, DNA homology, and immunity properties of HPlcl, S2, and the defective bacteriophage from strain Rd.

Authors:  M E Boling; D P Allison; J K Setlow
Journal:  J Virol       Date:  1973-04       Impact factor: 5.103
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  26 in total

1.  The transcriptional switch of bacteriophage WPhi, a P2-related but heteroimmune coliphage.

Authors:  T Liu; E Haggård-Ljungquist
Journal:  J Virol       Date:  1999-12       Impact factor: 5.103

2.  Vibrio cholerae phage K139: complete genome sequence and comparative genomics of related phages.

Authors:  Dagmar Kapfhammer; Julia Blass; Stefan Evers; Joachim Reidl
Journal:  J Bacteriol       Date:  2002-12       Impact factor: 3.490

3.  Bacteriophage HP2 of Haemophilus influenzae.

Authors:  Bryan J Williams; Miriam Golomb; Thomas Phillips; Joshua Brownlee; Maynard V Olson; Arnold L Smith
Journal:  J Bacteriol       Date:  2002-12       Impact factor: 3.490

4.  The Phage Proteomic Tree: a genome-based taxonomy for phage.

Authors:  Forest Rohwer; Rob Edwards
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

5.  Cloning and sequencing of a genomic island found in the Brazilian purpuric fever clone of Haemophilus influenzae biogroup aegyptius.

Authors:  Glen McGillivary; Andrew P Tomaras; Eric R Rhodes; Luis A Actis
Journal:  Infect Immun       Date:  2005-04       Impact factor: 3.441

6.  Identification of a gene encoding a functional reverse transcriptase within a highly variable locus in the P2-like coliphages.

Authors:  Richard Odegrip; Anders S Nilsson; Elisabeth Haggård-Ljungquist
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

7.  The integrase family of tyrosine recombinases: evolution of a conserved active site domain.

Authors:  D Esposito; J J Scocca
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

8.  Characterization of the major control region of Vibrio cholerae bacteriophage K139: immunity, exclusion, and integration.

Authors:  J Nesper; J Blass; M Fountoulakis; J Reidl
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

9.  Evolutionary stability of DNA uptake signal sequences in the Pasteurellaceae.

Authors:  M Bakkali; T-Y Chen; H C Lee; R J Redfield
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-19       Impact factor: 11.205

10.  Classification of Myoviridae bacteriophages using protein sequence similarity.

Authors:  Rob Lavigne; Paul Darius; Elizabeth J Summer; Donald Seto; Padmanabhan Mahadevan; Anders S Nilsson; Hans W Ackermann; Andrew M Kropinski
Journal:  BMC Microbiol       Date:  2009-10-26       Impact factor: 3.605
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