Literature DB >> 8706677

Transcription of four satellite DNA subfamilies in Diprion pini (Hymenoptera, Symphyta, Diprionidae).

F Rouleux-Bonnin1, S Renault, Y Bigot, G Periquet.   

Abstract

Four satellite DNA subfamilies Ps, Pv, Pv65 and Ec, resulting from the evolution of a common ancestral motif, were isolated and characterized in the genomic DNA of Diprion pini, a phytophagous of Pinus sylvestris. Consensus sequences were 148-312 bp long. Sequence analyses revealed that these satellite subfamilies have evolved from a 45-bp ancestral motif. The amounts of each satellite in the genome (0 - 10%) and the accessibility of the DNA to restriction enzymes were sex dependent. The migration of each monomer in polyacrylamide gels and the electrophoretic migration of d(AT) n > or = 3 residues showed that all four satellite subfamilies are curved. Their transcription was analyzed using reverse transcription and the polymerase chain reaction. Three satellite DNA subfamilies were transcribed on both strands, and in both sexes. However, the female satellite DNAs seem to be more actively transcribed than those of males, indicating that transcription is not constitutive. The lack of any significant open reading frame in satellite monomers indicates that the RNA may function as structural or catalytic RNA rather than encoding protein.

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Year:  1996        PMID: 8706677     DOI: 10.1111/j.1432-1033.1996.0752w.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  11 in total

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Authors:  J Rousselet; L Monti; M A Auger-Rozenberg; J S Parker; F Lemeunier
Journal:  Proc Biol Sci       Date:  2000-09-22       Impact factor: 5.349

2.  Hammerhead-mediated processing of satellite pDo500 family transcripts from Dolichopoda cave crickets.

Authors:  A A Rojas; A Vazquez-Tello; G Ferbeyre; F Venanzetti; L Bachmann; B Paquin; V Sbordoni; R Cedergren
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

Review 3.  Functional elements residing within satellite DNAs.

Authors:  Durdica Ugarkovic
Journal:  EMBO Rep       Date:  2005-11       Impact factor: 8.807

Review 4.  RNA turnover and chromatin-dependent gene silencing.

Authors:  Marc Bühler
Journal:  Chromosoma       Date:  2008-11-21       Impact factor: 4.316

5.  Cell cycle regulated transcription of heterochromatin in mammals vs. fission yeast: functional conservation or coincidence?

Authors:  Junjie Lu; David M Gilbert
Journal:  Cell Cycle       Date:  2008-04-29       Impact factor: 4.534

6.  CpSAT-1, a transcribed satellite sequence from the codling moth, Cydia pomonella.

Authors:  Pavlína Věchtová; Martina Dalíková; Miroslava Sýkorová; Martina Žurovcová; Zoltán Füssy; Magda Zrzavá
Journal:  Genetica       Date:  2016-05-28       Impact factor: 1.082

7.  Structural and functional characterization of noncoding repetitive RNAs transcribed in stressed human cells.

Authors:  Rut Valgardsdottir; Ilaria Chiodi; Manuela Giordano; Fabio Cobianchi; Silvano Riva; Giuseppe Biamonti
Journal:  Mol Biol Cell       Date:  2005-03-23       Impact factor: 4.138

8.  A step to the gigantic genome of the desert locust: chromosome sizes and repeated DNAs.

Authors:  J P M Camacho; F J Ruiz-Ruano; R Martín-Blázquez; M D López-León; J Cabrero; P Lorite; D C Cabral-de-Mello; M Bakkali
Journal:  Chromosoma       Date:  2014-12-05       Impact factor: 4.316

9.  Satellitome Analysis of Rhodnius prolixus, One of the Main Chagas Disease Vector Species.

Authors:  Eugenia E Montiel; Francisco Panzera; Teresa Palomeque; Pedro Lorite; Sebastián Pita
Journal:  Int J Mol Sci       Date:  2021-06-03       Impact factor: 5.923

10.  RNA Pol II promotes transcription of centromeric satellite DNA in beetles.

Authors:  Zeljka Pezer; Durdica Ugarković
Journal:  PLoS One       Date:  2008-02-13       Impact factor: 3.240

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