Literature DB >> 8696977

Recent developments in DNA topoisomerase II structure and mechanism.

J M Berger1, J C Wang.   

Abstract

Type II DNA topoisomerases are enzymes that are capable of transporting one duplex DNA through another. Recent experimental results, including the structure of a fragment of yeast topoisomerase II, have provided new insights into the mechanism of the strand passage reaction. Other results have begun to define the role of ATP in the catalytic cycle and illuminate how DNA breaks mediated by topoisomerase II can occur.

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Year:  1996        PMID: 8696977     DOI: 10.1016/s0959-440x(96)80099-6

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  19 in total

1.  Mechanism of topology simplification by type II DNA topoisomerases.

Authors:  A V Vologodskii; W Zhang; V V Rybenkov; A A Podtelezhnikov; D Subramanian; J D Griffith; N R Cozzarelli
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

2.  Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases.

Authors:  Michael D Stone; Zev Bryant; Nancy J Crisona; Steven B Smith; Alexander Vologodskii; Carlos Bustamante; Nicholas R Cozzarelli
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-11       Impact factor: 11.205

3.  The C-terminal domain of DNA gyrase A adopts a DNA-bending beta-pinwheel fold.

Authors:  Kevin D Corbett; Ryan K Shultzaberger; James M Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

4.  Random state transitions of knots: a first step towards modeling unknotting by type II topoisomerases.

Authors:  Xia Hua; Diana Nguyen; Barath Raghavan; Javier Arsuaga; Mariel Vazquez
Journal:  Topol Appl       Date:  2007-04-01       Impact factor: 0.617

5.  Dynamics of strand passage catalyzed by topoisomerase II.

Authors:  Ping Xie
Journal:  Eur Biophys J       Date:  2010-02-03       Impact factor: 1.733

6.  A molecular level picture of the stabilization of A-DNA in mixed ethanol-water solutions.

Authors:  T E Cheatham; M F Crowley; T Fox; P A Kollman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

7.  Topoisomerase II drives DNA transport by hydrolyzing one ATP.

Authors:  C L Baird; T T Harkins; S K Morris; J E Lindsley
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

8.  The architecture of the human Rad54-DNA complex provides evidence for protein translocation along DNA.

Authors:  D Ristic; C Wyman; C Paulusma; R Kanaar
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

9.  Toprim--a conserved catalytic domain in type IA and II topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins.

Authors:  L Aravind; D D Leipe; E V Koonin
Journal:  Nucleic Acids Res       Date:  1998-09-15       Impact factor: 16.971

10.  A diazirine-based photoaffinity etoposide probe for labeling topoisomerase II.

Authors:  Gaik-Lean Chee; Jack C Yalowich; Andrew Bodner; Xing Wu; Brian B Hasinoff
Journal:  Bioorg Med Chem       Date:  2009-11-27       Impact factor: 3.641

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