Literature DB >> 8681133

Karyotype distributions in a stochastic model of reciprocal translocation.

D Sankoff1, V Ferretti.   

Abstract

A random process of reciprocal translocation for a fixed number k of chromosomes (or arms) will have an equilibrium distribution of chromosome lengths. In this paper we calculate this distribution, by analytical means for k = 2 and partially for k = 3, and simulate the means of the marginal distributions for higher k. We compare this with a random (i.e., ahistorical) distribution of genomic DNA among k chromosomes and to a selection of karyotypes of real organisms. The results motivate a revised model where translocations giving rise to undersize chromosomes are disadvantaged.

Mesh:

Year:  1996        PMID: 8681133     DOI: 10.1101/gr.6.1.1

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  4 in total

1.  Rapid design of denaturing gradient-based two-dimensional electrophoretic gene mutational scanning tests.

Authors:  N J van Orsouw; R K Dhanda; R D Rines; W M Smith; I Sigalas; C Eng; J Vijg
Journal:  Nucleic Acids Res       Date:  1998-05-15       Impact factor: 16.971

2.  Extent of genomic rearrangement after genome duplication in yeast.

Authors:  C Seoighe; K H Wolfe
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-14       Impact factor: 11.205

3.  Chromosome size in diploid eukaryotic species centers on the average length with a conserved boundary.

Authors:  Xianran Li; Chengsong Zhu; Zhongwei Lin; Yun Wu; Dabao Zhang; Guihua Bai; Weixing Song; Jianxin Ma; Gary J Muehlbauer; Michael J Scanlon; Min Zhang; Jianming Yu
Journal:  Mol Biol Evol       Date:  2011-01-13       Impact factor: 16.240

4.  Breaking Good: Accounting for Fragility of Genomic Regions in Rearrangement Distance Estimation.

Authors:  Priscila Biller; Laurent Guéguen; Carole Knibbe; Eric Tannier
Journal:  Genome Biol Evol       Date:  2016-05-22       Impact factor: 3.416

  4 in total

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