Literature DB >> 8675036

Phylogeny based on elongation factor Tu reflects the phenotypic features of mycoplasmas better than that based on 16S rRNA.

V Kamla1, B Henrich, U Hadding.   

Abstract

A universal phylogenetic tree of organisms from all kingdoms was constructed by the use of elongation factor Tu (EF-Tu) as the marker molecule. As in the 16S ribosomal RNA (16S rRNA)-based phylogeny, the EF-Tu tree divides eukaryotes, archaebacteria, and prokaryotes into three main branches. Furthermore, the EF-Tu-based tree shows, in contrast to the 16S rRNA tree, some interesting evolutionary relationships between mycoplasmas, better reflecting phenotypic features of these organisms.

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Year:  1996        PMID: 8675036     DOI: 10.1016/0378-1119(95)00884-5

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  9 in total

1.  Radiation-Resistant Micrococcus luteus SC1204 and Its Proteomics Change Upon Gamma Irradiation.

Authors:  Wuyuan Deng; Yang Yang; Peng Gao; Hao Chen; Wenting Wen; Qun Sun
Journal:  Curr Microbiol       Date:  2016-02-26       Impact factor: 2.188

Review 2.  Molecular biology and pathogenicity of mycoplasmas.

Authors:  S Razin; D Yogev; Y Naot
Journal:  Microbiol Mol Biol Rev       Date:  1998-12       Impact factor: 11.056

3.  Phylogenetic relationships among mycoplasmas based on the whole genomic information.

Authors:  Kenro Oshima; Hiromi Nishida
Journal:  J Mol Evol       Date:  2007-08-09       Impact factor: 2.395

4.  Amino acid changes in elongation factor Tu of Mycoplasma pneumoniae and Mycoplasma genitalium influence fibronectin binding.

Authors:  Sowmya Balasubramanian; T R Kannan; P John Hart; Joel B Baseman
Journal:  Infect Immun       Date:  2009-06-22       Impact factor: 3.441

5.  A novel rapid DNA microarray assay enables identification of 37 Mycoplasma species and highlights multiple Mycoplasma infections.

Authors:  Christiane Schnee; Samuel Schulsse; Helmut Hotzel; Roger D Ayling; Robin A J Nicholas; Evelyn Schubert; Martin Heller; Ralf Ehricht; Konrad Sachse
Journal:  PLoS One       Date:  2012-03-29       Impact factor: 3.240

6.  Intrinsic laws of k-mer spectra of genome sequences and evolution mechanism of genomes.

Authors:  Zhenhua Yang; Hong Li; Yun Jia; Yan Zheng; Hu Meng; Tonglaga Bao; Xiaolong Li; Liaofu Luo
Journal:  BMC Evol Biol       Date:  2020-11-23       Impact factor: 3.260

7.  Phylogenetic position of aquificales based on the whole genome sequences of six aquificales species.

Authors:  Kenro Oshima; Yoko Chiba; Yasuo Igarashi; Hiroyuki Arai; Masaharu Ishii
Journal:  Int J Evol Biol       Date:  2012-07-12

8.  Non-ribosomal phylogenetic exploration of Mollicute species: new insights into haemoplasma taxonomy.

Authors:  C A E Hicks; E N Barker; C Brady; C R Stokes; C R Helps; S Tasker
Journal:  Infect Genet Evol       Date:  2014-02-08       Impact factor: 3.342

9.  Phylogeny Reconstruction with Alignment-Free Method That Corrects for Horizontal Gene Transfer.

Authors:  Raquel Bromberg; Nick V Grishin; Zbyszek Otwinowski
Journal:  PLoS Comput Biol       Date:  2016-06-23       Impact factor: 4.475

  9 in total

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