Literature DB >> 8670796

Functional analyses of active site residues of human lysosomal aspartylglucosaminidase: implications for catalytic mechanism and autocatalytic activation.

R Tikkanen1, A Riikonen, C Oinonen, R Rouvinen, L Peltonen.   

Abstract

Aspartylglucosaminidase (AGA) is a lysosomal asparaginase that participates in the breakdown of glycoproteins by cleaving the amide bond between the asparagine and the oligosaccharide chain. Active AGA is an (alphabeta)2 heterotetramer of two non-identical subunits that are cleaved proteolytically from an enzymatically inactive precursor polypeptide. On the basis of the three-dimensional structure recently determined by us, we have here mutagenized the putative active site amino acids of AGA and studied by transient expression the effect of targeted substitutions on the enzyme activity and catalytic properties of AGA. These analyses support the novel type of catalytic mechanism, suggested previously by us, in which AGA utilizes as the nucleophile the N-terminal residue of the beta subunit and most importantly its alpha-amino group as a base that increases the nucleophilicity of the OH group. We also provide evidence for autocatalytic activation of the inactive AGA precursor and putative involvement of active site amino acids in the proteolytic processing. The data obtained on the structure and function of AGA would indicate that AGA is a member of a recently described novel class of hydrolytic enzymes (amidohydrolases) sharing a common structural determinant in their three-dimensional structure and whose catalytic mechanisms with an N-terminal nucleophile seem basically to be similar.

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Year:  1996        PMID: 8670796      PMCID: PMC450236     

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  23 in total

1.  Cloning and characterization of the genes for two distinct cephalosporin acylases from a Pseudomonas strain.

Authors:  A Matsuda; K Matsuyama; K Yamamoto; S Ichikawa; K Komatsu
Journal:  J Bacteriol       Date:  1987-12       Impact factor: 3.490

2.  Large-scale purification and preliminary x-ray diffraction studies of human aspartylglucosaminidase.

Authors:  R Tikkanen; J Rouvinen; A Törrönen; N Kalkkinen; L Peltonen
Journal:  Proteins       Date:  1996-02

3.  Studies on enzymes acting on glycopeptides.

Authors:  M Makino; T Kojima; T Ohgushi; I Yamashina
Journal:  J Biochem       Date:  1968-02       Impact factor: 3.387

4.  Proteasome from Thermoplasma acidophilum: a threonine protease.

Authors:  E Seemüller; A Lupas; D Stock; J Löwe; R Huber; W Baumeister
Journal:  Science       Date:  1995-04-28       Impact factor: 47.728

5.  A protein catalytic framework with an N-terminal nucleophile is capable of self-activation.

Authors:  J A Brannigan; G Dodson; H J Duggleby; P C Moody; J L Smith; D R Tomchick; A G Murzin
Journal:  Nature       Date:  1995-11-23       Impact factor: 49.962

6.  Three-dimensional structure of human lysosomal aspartylglucosaminidase.

Authors:  C Oinonen; R Tikkanen; J Rouvinen; L Peltonen
Journal:  Nat Struct Biol       Date:  1995-12

7.  High efficiency polyoma DNA transfection of chloroquine treated cells.

Authors:  H Luthman; G Magnusson
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

8.  Intracellular sorting of aspartylglucosaminidase: the role of N-linked oligosaccharides and evidence of Man-6-P-independent lysosomal targeting.

Authors:  R Tikkanen; N Enomaa; A Riikonen; E Ikonen; L Peltonen
Journal:  DNA Cell Biol       Date:  1995-04       Impact factor: 3.311

9.  Molecular cloning and structure of the gene for 7 beta-(4-carboxybutanamido)cephalosporanic acid acylase from a Pseudomonas strain.

Authors:  A Matsuda; K I Komatsu
Journal:  J Bacteriol       Date:  1985-09       Impact factor: 3.490

10.  Critical elements in proteasome assembly.

Authors:  P Zwickl; J Kleinz; W Baumeister
Journal:  Nat Struct Biol       Date:  1994-11
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  25 in total

1.  Structural comparison of Ntn-hydrolases.

Authors:  C Oinonen; J Rouvinen
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

2.  Three-dimensional structure of nylon hydrolase and mechanism of nylon-6 hydrolysis.

Authors:  Seiji Negoro; Naoki Shibata; Yusuke Tanaka; Kengo Yasuhira; Hiroshi Shibata; Haruka Hashimoto; Young-Ho Lee; Shohei Oshima; Ryuji Santa; Shohei Oshima; Kozo Mochiji; Yuji Goto; Takahisa Ikegami; Keisuke Nagai; Dai-Ichiro Kato; Masahiro Takeo; Yoshiki Higuchi
Journal:  J Biol Chem       Date:  2011-12-19       Impact factor: 5.157

3.  Elucidation of the specific function of the conserved threonine triad responsible for human L-asparaginase autocleavage and substrate hydrolysis.

Authors:  Julian Nomme; Ying Su; Arnon Lavie
Journal:  J Mol Biol       Date:  2014-04-22       Impact factor: 5.469

4.  Biosynthesis of endotubin: an apical early endosomal glycoprotein from developing rat intestinal epithelial cells.

Authors:  K Allen; K E Gokay; M A Thomas; B A Speelman; J M Wilson
Journal:  Biochem J       Date:  1998-02-15       Impact factor: 3.857

5.  Crystal structure of glycosylasparaginase from Flavobacterium meningosepticum.

Authors:  J Xuan; A L Tarentino; B G Grimwood; T H Plummer; T Cui; C Guan; P Van Roey
Journal:  Protein Sci       Date:  1998-03       Impact factor: 6.725

Review 6.  Structure and structure formation of the 20S proteasome.

Authors:  M Schmidt; G Schmidtke; P M Kloetzel
Journal:  Mol Biol Rep       Date:  1997-03       Impact factor: 2.316

7.  Overgrowth of oral mucosa and facial skin, a novel feature of aspartylglucosaminuria.

Authors:  P Arvio; M Arvio; M Kero; S Pirinen; P L Lukinmaa
Journal:  J Med Genet       Date:  1999-05       Impact factor: 6.318

8.  Structural basis of a point mutation that causes the genetic disease aspartylglucosaminuria.

Authors:  Lufei Sui; Damodharan Lakshminarasimhan; Suchita Pande; Hwai-Chen Guo
Journal:  Structure       Date:  2014-11-13       Impact factor: 5.006

9.  Two-step autocatalytic processing of the glutaryl 7-aminocephalosporanic acid acylase from Pseudomonas sp. strain GK16.

Authors:  Y S Lee; S S Park
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

10.  Several cooperating binding sites mediate the interaction of a lysosomal enzyme with phosphotransferase.

Authors:  R Tikkanen; M Peltola; C Oinonen; J Rouvinen; L Peltonen
Journal:  EMBO J       Date:  1997-11-17       Impact factor: 11.598

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