Literature DB >> 8665862

Multiple roles for divalent metal ions in DNA transposition: distinct stages of Tn10 transposition have different Mg2+ requirements.

M S Junop1, D B Haniford.   

Abstract

Tn10 transposition takes place by a non-replicative mechanism in which the transposon is excised from donor DNA and integrated into a target site. Mg2+ is an essential cofactor in this reaction. We have examined the Mg2+ requirements at various steps in Tn10 transposition. Results presented here demonstrate that Tn10 excision can occur efficiently at a 16-fold lower Mg2+ concentration than strand transfer and that, at Mg2+ concentrations in the range of 60-fold below the wildt-ype optimum, double strand cleavage events at the two transposon ends are completely uncoupled. These experiments identify specific breakpoints in Tn10 transposition which are sensitive to Mg2+ concentration. Whereas the uncoupling of double strand cleavage events at the two transposon ends most likely reflects the inability of two separate IS10 transposase monomers in the synaptic complex to bind Mg2+, the uncoupling of transposon excision from strand transfer is expected to reflect either a conformational change in the active site or the existence of an Mg2+ binding site which functions specifically in target interactions. We also show that Mn2+ relaxes target specificity in Tn10 transposition and suppresses a class of mutants which are blocked specifically for integration. These observations can be explained by a model in which sequence-specific target site binding is tightly coupled to a conformational change in the synaptic complex which is required for catalysis of strand transfer.

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Year:  1996        PMID: 8665862      PMCID: PMC450187     

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  45 in total

1.  Intramolecular transposition by Tn10.

Authors:  H W Benjamin; N Kleckner
Journal:  Cell       Date:  1989-10-20       Impact factor: 41.582

2.  Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing.

Authors:  Y C Kim; J C Grable; R Love; P J Greene; J M Rosenberg
Journal:  Science       Date:  1990-09-14       Impact factor: 47.728

3.  Altering the specificity of restriction endonuclease: effect of replacing Mg2+ with Mn2+.

Authors:  M Hsu; P Berg
Journal:  Biochemistry       Date:  1978-01-10       Impact factor: 3.162

4.  A specific class of IS10 transposase mutants are blocked for target site interactions and promote formation of an excised transposon fragment.

Authors:  D B Haniford; A R Chelouche; N Kleckner
Journal:  Cell       Date:  1989-10-20       Impact factor: 41.582

5.  Transpososomes: stable protein-DNA complexes involved in the in vitro transposition of bacteriophage Mu DNA.

Authors:  M G Surette; S J Buch; G Chaconas
Journal:  Cell       Date:  1987-04-24       Impact factor: 41.582

6.  Transposition of Mu DNA: joining of Mu to target DNA can be uncoupled from cleavage at the ends of Mu.

Authors:  R Craigie; K Mizuuchi
Journal:  Cell       Date:  1987-11-06       Impact factor: 41.582

7.  Genetic evidence that Tn10 transposes by a nonreplicative mechanism.

Authors:  J Bender; N Kleckner
Journal:  Cell       Date:  1986-06-20       Impact factor: 41.582

8.  The avian retroviral integration protein cleaves the terminal sequences of linear viral DNA at the in vivo sites of integration.

Authors:  M Katzman; R A Katz; A M Skalka; J Leis
Journal:  J Virol       Date:  1989-12       Impact factor: 5.103

9.  A symmetrical six-base-pair target site sequence determines Tn10 insertion specificity.

Authors:  S M Halling; N Kleckner
Journal:  Cell       Date:  1982-01       Impact factor: 41.582

10.  Mutational analysis of IS10's outside end.

Authors:  O Huisman; P R Errada; L Signon; N Kleckner
Journal:  EMBO J       Date:  1989-07       Impact factor: 11.598

View more
  10 in total

1.  Protein-DNA contacts and conformational changes in the Tn10 transpososome during assembly and activation for cleavage.

Authors:  P Crellin; R Chalmers
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

2.  Factors responsible for target site selection in Tn10 transposition: a role for the DDE motif in target DNA capture.

Authors:  M S Junop; D B Haniford
Journal:  EMBO J       Date:  1997-05-15       Impact factor: 11.598

3.  Incorporation of nucleoside probes opposite O⁶-methylguanine by Sulfolobus solfataricus DNA polymerase Dpo4: importance of hydrogen bonding.

Authors:  Alessia Stornetta; Todor Angelov; F Peter Guengerich; Shana J Sturla
Journal:  Chembiochem       Date:  2013-08-19       Impact factor: 3.164

4.  Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.

Authors:  Alexandra Vaisman; Hong Ling; Roger Woodgate; Wei Yang
Journal:  EMBO J       Date:  2005-08-18       Impact factor: 11.598

5.  Translesion synthesis of the major nitrogen mustard-induced DNA lesion by human DNA polymerase η.

Authors:  Hunmin Jung; Naveen Kumar Rayala; Seongmin Lee
Journal:  Biochem J       Date:  2020-12-11       Impact factor: 3.857

6.  Tn552 transposase catalyzes concerted strand transfer in vitro.

Authors:  A E Leschziner; T J Griffin; N D Grindley
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

7.  Divalent metal ion differentially regulates the sequential nicking reactions of the GIY-YIG homing endonuclease I-BmoI.

Authors:  Benjamin P Kleinstiver; Wesley Bérubé-Janzen; Andrew D Fernandes; David R Edgell
Journal:  PLoS One       Date:  2011-08-22       Impact factor: 3.240

8.  Calcium inhibition of ribonuclease H1 two-metal ion catalysis.

Authors:  Edina Rosta; Wei Yang; Gerhard Hummer
Journal:  J Am Chem Soc       Date:  2014-02-18       Impact factor: 15.419

9.  Metal-dependent conformational activation explains highly promutagenic replication across O6-methylguanine by human DNA polymerase β.

Authors:  Myong-Chul Koag; Seongmin Lee
Journal:  J Am Chem Soc       Date:  2014-04-02       Impact factor: 15.419

10.  Prototype Foamy Virus Integrase Displays Unique Biochemical Activities among Retroviral Integrases.

Authors:  Anthony J Rabe; Yow Yong Tan; Ross C Larue; Kristine E Yoder
Journal:  Biomolecules       Date:  2021-12-20
  10 in total

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