Literature DB >> 8663938

Identifying microbial diversity in the natural environment: a molecular phylogenetic approach.

P Hugenholtz1, N R Pace.   

Abstract

Our knowledge of microbial biodiversity has been severely limited by relying on microorganisms that have been cultured; these represent only a tiny fraction of the microbial diversity in the environment. Recently, however, recombinant DNA and molecular phylogenetic techniques have provided methods for characterizing natural microbial communities without the need to cultivate organisms. These techniques have allowed a glimpse of the complexity of microbial communities and the huge, largely untapped, biotechnological resource that they represent.

Mesh:

Year:  1996        PMID: 8663938     DOI: 10.1016/0167-7799(96)10025-1

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  66 in total

1.  Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis.

Authors:  E O Casamayor; H Schäfer; L Bañeras; C Pedrós-Alió; G Muyzer
Journal:  Appl Environ Microbiol       Date:  2000-02       Impact factor: 4.792

2.  Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms.

Authors:  M R Rondon; P R August; A D Bettermann; S F Brady; T H Grossman; M R Liles; K A Loiacono; B A Lynch; I A MacNeil; C Minor; C L Tiong; M Gilman; M S Osburne; J Clardy; J Handelsman; R M Goodman
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

3.  Influence of sulfide and temperature on species composition and community structure of hot spring microbial mats.

Authors:  S Skirnisdottir; G O Hreggvidsson; S Hjörleifsdottir; V T Marteinsson; S K Petursdottir; O Holst; J K Kristjansson
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

4.  Metabolically active eukaryotic communities in extremely acidic mine drainage.

Authors:  Brett J Baker; Michelle A Lutz; Scott C Dawson; Philip L Bond; Jillian F Banfield
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

5.  Characterization of airborne bacteria at an underground subway station.

Authors:  Marius Dybwad; Per Einar Granum; Per Bruheim; Janet Martha Blatny
Journal:  Appl Environ Microbiol       Date:  2012-01-13       Impact factor: 4.792

6.  Characterization of a forest soil metagenome clone that confers indirubin and indigo production on Escherichia coli.

Authors:  He Kyoung Lim; Eu Jin Chung; Jin-Cheol Kim; Gyung Ja Choi; Kyoung Soo Jang; Young Ryun Chung; Kwang Yun Cho; Seon-Woo Lee
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

7.  Molecular analysis of human forearm superficial skin bacterial biota.

Authors:  Zhan Gao; Chi-hong Tseng; Zhiheng Pei; Martin J Blaser
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-09       Impact factor: 11.205

8.  Vertical distribution and diversity of bacteria and archaea in sulfide and methane-rich cold seep sediments located at the base of the Florida Escarpment.

Authors:  Andrew J Reed; Richard A Lutz; Costantino Vetriani
Journal:  Extremophiles       Date:  2006-02-08       Impact factor: 2.395

Review 9.  Genotypic microbial community profiling: a critical technical review.

Authors:  Andreas Nocker; Mark Burr; Anne K Camper
Journal:  Microb Ecol       Date:  2007-03-08       Impact factor: 4.552

10.  Culture-dependent and -independent methods to investigate the microbial ecology of Italian fermented sausages.

Authors:  Kalliopi Rantsiou; Rosalinda Urso; Lucilla Iacumin; Carlo Cantoni; Patrizia Cattaneo; Giuseppe Comi; Luca Cocolin
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

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