Literature DB >> 8660438

Tandemly repeated satellite DNA of Dolichopoda schiavazzii: a test for models on the evolution of highly repetitive DNA.

L Bachmann1, F Venanzetti, V Sbordoni.   

Abstract

Three specific satellite DNA families can be detected in the genome of the cave cricket Dolichopoda schiavazzii. The pDoP102 and the pDsPv400 families are species specific for D. schiavazzii; the pDoP500 family is probably present in all Dolichopoda species. The three satellite DNA families were characterized from individuals of three isolated populations of D. schiavazzii with respect to nucleotide sequence, sequence complexity, sequence variability, and copy number. This unique data set on satellite DNAs of D. schiavazzii seems to allow one to test the significance of theoretical approaches to the mode of evolution of noncoding, tandemly arranged satellite DNA. At least for satellite DNAs of D. schiavazzii two clear trends were observed: (1) sequence variability increases with copy number and (2) the repeat length decreases with copy number. The first trend is in good agreement with the theory but the second is not. Thus, a revision of the models is proposed.

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Year:  1996        PMID: 8660438     DOI: 10.1007/bf02337358

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  18 in total

1.  Crossing over and Heterochromatin in the X Chromosome of Drosophila Melanogaster.

Authors:  K Mather
Journal:  Genetics       Date:  1939-04       Impact factor: 4.562

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Authors:  G P Smith
Journal:  Science       Date:  1976-02-13       Impact factor: 47.728

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Authors:  J G Gall; D D Atherton
Journal:  J Mol Biol       Date:  1974-01-05       Impact factor: 5.469

4.  Persistence of tandem arrays: implications for satellite and simple-sequence DNAs.

Authors:  J B Walsh
Journal:  Genetics       Date:  1987-03       Impact factor: 4.562

5.  Conservation and divergence in multigene families: alternatives to selection and drift.

Authors:  G A Dover; D Tautz
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1986-01-29       Impact factor: 6.237

6.  Possible role of natural selection in the formation of tandem-repetitive noncoding DNA.

Authors:  W Stephan; S Cho
Journal:  Genetics       Date:  1994-01       Impact factor: 4.562

Review 7.  The genetic analysis of meiosis in female Drosophila melanogaster.

Authors:  D L Lindsley; L Sandler
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1977-03-21       Impact factor: 6.237

8.  Characterization of a species-specific satellite DNA family of Dolichopoda schiavazzii (Orthoptera, Rhaphidophoridae) cave crickets.

Authors:  L Bachmann; F Venanzetti; V Sbordoni
Journal:  J Mol Evol       Date:  1994-09       Impact factor: 2.395

9.  Tandem-repetitive noncoding DNA: forms and forces.

Authors:  W Stephan
Journal:  Mol Biol Evol       Date:  1989-03       Impact factor: 16.240

10.  The molecular genetics of Enhancer of split, a gene required for embryonic neural development in Drosophila.

Authors:  A Preiss; D A Hartley; S Artavanis-Tsakonas
Journal:  EMBO J       Date:  1988-12-01       Impact factor: 11.598

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  9 in total

1.  Hammerhead-mediated processing of satellite pDo500 family transcripts from Dolichopoda cave crickets.

Authors:  A A Rojas; A Vazquez-Tello; G Ferbeyre; F Venanzetti; L Bachmann; B Paquin; V Sbordoni; R Cedergren
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

2.  Low rates of homogenization of the DBC-150 satellite DNA family restricted to a single pair of microchromosomes in species from the Drosophila buzzatii cluster.

Authors:  Gustavo C S Kuhn; Fernando F Franco; Maura H Manfrin; Orlando Moreira-Filho; Fabio M Sene
Journal:  Chromosome Res       Date:  2007-05-15       Impact factor: 5.239

3.  Conformational heterogeneity and the determinants of tertiary stabilization in the hammerhead ribozyme from Dolichopoda cave crickets.

Authors:  Manami Roychowdhury-Saha; Sugata Roychowdhury; Donald H Burke
Journal:  RNA Biol       Date:  2011-06-29       Impact factor: 4.652

4.  Highly repetitive DNA families restricted to germ cells in a Japanese hagfish (Eptatretus burgeri): a hierarchical and mosaic structure in eliminated chromosomes.

Authors:  S Kubota; J Takano; R Tsuneishi; S Kobayakawa; N Fujikawa; M Nabeyama; S Kohno
Journal:  Genetica       Date:  2001       Impact factor: 1.082

5.  Is radon emission in caves causing deletions in satellite DNA sequences of cave-dwelling crickets?

Authors:  Giuliana Allegrucci; Valerio Sbordoni; Donatella Cesaroni
Journal:  PLoS One       Date:  2015-03-30       Impact factor: 3.240

6.  High-throughput analysis of the satellitome revealed enormous diversity of satellite DNAs in the neo-Y chromosome of the cricket Eneoptera surinamensis.

Authors:  Octavio Manuel Palacios-Gimenez; Guilherme Borges Dias; Leonardo Gomes de Lima; Gustavo Campos E Silva Kuhn; Érica Ramos; Cesar Martins; Diogo Cavalcanti Cabral-de-Mello
Journal:  Sci Rep       Date:  2017-07-25       Impact factor: 4.379

7.  Satellite DNAs are conserved and differentially transcribed among Gryllus cricket species.

Authors:  Octavio Manuel Palacios-Gimenez; Vanessa Bellini Bardella; Bernardo Lemos; Diogo Cavalcanti Cabral-de-Mello
Journal:  DNA Res       Date:  2018-04-01       Impact factor: 4.458

8.  Molecular evolution of the pDo500 satellite DNA family in Dolichopoda cave crickets (Rhaphidophoridae).

Authors:  Lene Martinsen; Federica Venanzetti; Arild Johnsen; Valerio Sbordoni; Lutz Bachmann
Journal:  BMC Evol Biol       Date:  2009-12-28       Impact factor: 3.260

9.  Phylogenetic footprinting of non-coding RNA: hammerhead ribozyme sequences in a satellite DNA family of Dolichopoda cave crickets (Orthoptera, Rhaphidophoridae).

Authors:  Lene Martinsen; Arild Johnsen; Federica Venanzetti; Lutz Bachmann
Journal:  BMC Evol Biol       Date:  2010-01-04       Impact factor: 3.260

  9 in total

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