Literature DB >> 8655509

Ti plasmid-encoded genes responsible for catabolism of the crown gall opine mannopine by Agrobacterium tumefaciens are homologs of the T-region genes responsible for synthesis of this opine by the plant tumor.

K S Kim1, S K Farrand.   

Abstract

Agrobacterium tumefaciens NT1 harboring pSaB4, which contains the 14-kb BamHI fragment 4 from the octopine/mannityl opine-type Ti plasmid pTi15955, grew well with agropine (AGR) but slowly with mannopine (MOP) as the sole carbon source. When a second plasmid encoding a dedicated transport system for MOP was introduced, these cells grew well with both AGR and MOP. Transposon insertion mutagenesis and subcloning identified a 5.7-kb region of BamHI fragment 4 that encodes functions required for the degradation of MOP. DNA sequence analysis revealed seven putative genes in this region: mocD (moc for mannityl opine catabolism) and mocE, oriented from right to left, and mocRCBAS, oriented from left to right. Significant identities exist at the nucleotide and derived amino acid sequence levels between these moc genes and the mas genes that are responsible for opine biosynthesis in crown gall tumors. MocD is a homolog of Mas2, the anabolic conjugase encoded by mas2'. MocE and MocC are related to the amino half and the carboxyl half, respectively, of Mas1 (MOP reductase), the second enzyme for MOP biosynthesis. These results indicate that the moc and mas genes evolved from a common origin. MocR and MocS are related to each other and to a putative repressor for the AGR degradation system encoded by the rhizogenic plasmid pRiA4. MocB and MocA are homologs of 6-phosphogluconate dehydratase and glucose-6-phosphate dehydrogenase, respectively. Mutations in mocD and mocE, but not mocC, are suppressed by functions encoded by the chromosome or the 450-kb megaplasmid present in many Agrobacterium isolates. We propose that moc genes derived from genes located elsewhere in the bacterial genome and that the tumor-expressed mas genes evolved from the bacterial moc genes.

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Year:  1996        PMID: 8655509      PMCID: PMC178081          DOI: 10.1128/jb.178.11.3275-3284.1996

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  44 in total

1.  A Ti plasmid-encoded enzyme required for degradation of mannopine is functionally homologous to the T-region-encoded enzyme required for synthesis of this opine in crown gall tumors.

Authors:  K S Kim; W S Chilton; S K Farrand
Journal:  J Bacteriol       Date:  1996-06       Impact factor: 3.490

2.  Promoters of Agrobacterium tumefaciens Ti-plasmid virulence genes.

Authors:  A Das; S Stachel; P Ebert; P Allenza; A Montoya; E Nester
Journal:  Nucleic Acids Res       Date:  1986-02-11       Impact factor: 16.971

Review 3.  The use of transposon Tn5 mutagenesis in the rapid generation of correlated physical and genetic maps of DNA segments cloned into multicopy plasmids--a review.

Authors:  F J de Bruijn; J R Lupski
Journal:  Gene       Date:  1984-02       Impact factor: 3.688

4.  Genetic analysis of mannityl opine catabolism in octopine-type Agrobacterium tumefaciens strain 15955.

Authors:  Y Dessaux; J Tempé; S K Farrand
Journal:  Mol Gen Genet       Date:  1987-06

5.  Isolation, purification, and characterization of an Amadori product binding protein from a Pseudomonas sp. soil strain.

Authors:  C Gerhardinger; S Taneda; M S Marion; V M Monnier
Journal:  J Biol Chem       Date:  1994-11-04       Impact factor: 5.157

6.  Multiple genes coding for octopine-degrading enzymes in Agrobacterium.

Authors:  A L Montoya; L W Moore; M P Gordon; E W Nester
Journal:  J Bacteriol       Date:  1978-12       Impact factor: 3.490

7.  Novel Ti plasmids in Agrobacterium strains isolated from fig tree and chrysanthemum tumors and their opinelike molecules.

Authors:  V Vaudequin-Dransart; A Petit; C Poncet; C Ponsonnet; X Nesme; J B Jones; H Bouzar; W S Chilton; Y Dessaux
Journal:  Mol Plant Microbe Interact       Date:  1995 Mar-Apr       Impact factor: 4.171

8.  Nucleotide sequence of gene pfkB encoding the minor phosphofructokinase of Escherichia coli K-12.

Authors:  F Daldal
Journal:  Gene       Date:  1984-06       Impact factor: 3.688

9.  Characterization and mapping of the agrocinopine-agrocin 84 locus on the nopaline Ti plasmid pTiC58.

Authors:  G T Hayman; S K Farrand
Journal:  J Bacteriol       Date:  1988-04       Impact factor: 3.490

10.  Opine utilization by Agrobacterium spp.: octopine-type Ti plasmids encode two pathways for mannopinic acid degradation.

Authors:  Y Dessaux; P Guyon; A Petit; J Tempé; M Demarez; C Legrain; M E Tate; S K Farrand
Journal:  J Bacteriol       Date:  1988-07       Impact factor: 3.490

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  14 in total

Review 1.  The bases of crown gall tumorigenesis.

Authors:  J Zhu; P M Oger; B Schrammeijer; P J Hooykaas; S K Farrand; S C Winans
Journal:  J Bacteriol       Date:  2000-07       Impact factor: 3.490

2.  A Ti plasmid-encoded enzyme required for degradation of mannopine is functionally homologous to the T-region-encoded enzyme required for synthesis of this opine in crown gall tumors.

Authors:  K S Kim; W S Chilton; S K Farrand
Journal:  J Bacteriol       Date:  1996-06       Impact factor: 3.490

3.  Genome-wide mRNA profiling in glucose starved Bacillus subtilis cells.

Authors:  Torsten Koburger; Jimena Weibezahn; Jörg Bernhardt; Georg Homuth; M Hecker
Journal:  Mol Genet Genomics       Date:  2005-04-05       Impact factor: 3.291

4.  The Agrobacterium tumefaciens rnd homolog is required for TraR-mediated quorum-dependent activation of Ti plasmid tra gene expression.

Authors:  Z Q Luo; S K Farrand
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

5.  A novel Sinorhizobium meliloti operon encodes an alpha-glucosidase and a periplasmic-binding-protein-dependent transport system for alpha-glucosides.

Authors:  L B Willis; G C Walker
Journal:  J Bacteriol       Date:  1999-07       Impact factor: 3.490

6.  A T-DNA gene required for agropine biosynthesis by transformed plants is functionally and evolutionarily related to a Ti plasmid gene required for catabolism of agropine by Agrobacterium strains.

Authors:  S B Hong; I Hwang; Y Dessaux; P Guyon; K S Kim; S K Farrand
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

7.  Characterization of the acc operon from the nopaline-type Ti plasmid pTiC58, which encodes utilization of agrocinopines A and B and susceptibility to agrocin 84.

Authors:  H Kim; S K Farrand
Journal:  J Bacteriol       Date:  1997-12       Impact factor: 3.490

8.  Engineering root exudation of Lotus toward the production of two novel carbon compounds leads to the selection of distinct microbial populations in the rhizosphere.

Authors:  P M Oger; H Mansouri; X Nesme; Y Dessaux
Journal:  Microb Ecol       Date:  2004-01       Impact factor: 4.552

9.  Convergent evolution of Amadori opine catabolic systems in plasmids of Agrobacterium tumefaciens.

Authors:  Chang-Ho Baek; Stephen K Farrand; Ko-Eun Lee; Dae-Kyun Park; Jeong Kug Lee; Kun-Soo Kim
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

10.  Integrated Use of Biochemical, Native Mass Spectrometry, Computational, and Genome-Editing Methods to Elucidate the Mechanism of a Salmonella deglycase.

Authors:  Anindita Sengupta; Jikang Wu; Justin T Seffernick; Anice Sabag-Daigle; Nicholas Thomsen; Tien-Hao Chen; Angela Di Capua; Charles E Bell; Brian M M Ahmer; Steffen Lindert; Vicki H Wysocki; Venkat Gopalan
Journal:  J Mol Biol       Date:  2019-09-04       Impact factor: 5.469

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