Literature DB >> 8652571

Salt effects on the amide hydrogen exchange of bovine pancreatic trypsin inhibitor.

M Christoffersen1, S Bolvig, E Tüchsen.   

Abstract

Peptide hydrogen exchange is measured in bovine pancreatic trypsin inhibitor (BPTI) by 2D NMR in KCl solutions varying between 0.02 and 0.43 M. The effects of salt are analyzed for 16 assigned peptide groups located near the protein-solvent interface in the crystal structure. Salt effects are obtained for exchange by H+ and OH- catalysis, at pH 2.3 and 5.3, respectively. Semilogarithmic plots of rate constants vs the square root of the ionic strengths are virtually linear. The salt effects, taken as the slopes of these plots, vary both in size and sign for each catalytic process, reflecting the variation of local electrostatic field at the exchanging site. The effects are correlated with electrostatic potentials calculated by the finite differences method, taking into account both ionic and dipolar charges in the static structure. This suggests that the transition complexes between the catalyst and the protein are formed with the protein structure very similar to the crystal structure.

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Year:  1996        PMID: 8652571     DOI: 10.1021/bi951711q

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Neutralizing positive charges at the surface of a protein lowers its rate of amide hydrogen exchange without altering its structure or increasing its thermostability.

Authors:  Bryan F Shaw; Haribabu Arthanari; Max Narovlyansky; Armando Durazo; Dominique P Frueh; Michael P Pollastri; Andrew Lee; Basar Bilgicer; Steven P Gygi; Gerhard Wagner; George M Whitesides
Journal:  J Am Chem Soc       Date:  2010-11-19       Impact factor: 15.419

2.  Anion modulation of the 1H/2H exchange rates in backbone amide protons monitored by NMR spectroscopy.

Authors:  Xavier Tadeo; David Castaño; Oscar Millet
Journal:  Protein Sci       Date:  2007-10-26       Impact factor: 6.725

3.  Measurement of amide hydrogen exchange rates with the use of radiation damping.

Authors:  Jing-Song Fan; Jackwee Lim; Binhan Yu; Daiwen Yang
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

4.  Imidazolium Compounds as Internal Exchange Reporters for Hydrogen/Deuterium Exchange by Mass Spectrometry.

Authors:  Taylor A Murphree; Clint Vorauer; Marie Brzoska; Miklos Guttman
Journal:  Anal Chem       Date:  2020-07-07       Impact factor: 6.986

5.  The effect of ionic strength and specific anions on substrate binding and hydrolytic activities of Na,K-ATPase.

Authors:  J G Nørby; M Esmann
Journal:  J Gen Physiol       Date:  1997-05       Impact factor: 4.086

Review 6.  Advances in Hydrogen/Deuterium Exchange Mass Spectrometry and the Pursuit of Challenging Biological Systems.

Authors:  Ellie I James; Taylor A Murphree; Clint Vorauer; John R Engen; Miklos Guttman
Journal:  Chem Rev       Date:  2021-09-07       Impact factor: 72.087

7.  HDfleX: Software for Flexible High Structural Resolution of Hydrogen/Deuterium-Exchange Mass Spectrometry Data.

Authors:  Neeleema Seetaloo; Monika Kish; Jonathan J Phillips
Journal:  Anal Chem       Date:  2022-03-09       Impact factor: 8.008

  7 in total

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