Literature DB >> 8650166

Direct observation of fast protein folding: the initial collapse of apomyoglobin.

R M Ballew1, J Sabelko, M Gruebele.   

Abstract

The rapid refolding dynamics of apomyoglobin are followed by a new temperature-jump fluorescence technique on a 15-ns to 0.5-ms time scale in vitro. The apparatus measures the protein-folding history in a single sweep in standard aqueous buffers. The earliest steps during folding to a compact state are observed and are complete in under 20 micros. Experiments on mutants and consideration of steady-state CD and fluorescence spectra indicate that the observed microsecond phase monitors assembly of an A x (H x G) helix subunit. Measurements at different viscosities indicate diffusive behavior even at low viscosities, in agreement with motions of a solvent-exposed protein during the initial collapse.

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Year:  1996        PMID: 8650166      PMCID: PMC39134          DOI: 10.1073/pnas.93.12.5759

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Protein tertiary structure recognition using optimized Hamiltonians with local interactions.

Authors:  R A Goldstein; Z A Luthey-Schulten; P G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-01       Impact factor: 11.205

2.  Cleavage of the haem-protein link by acid methylethylketone.

Authors:  F W TEALE
Journal:  Biochim Biophys Acta       Date:  1959-10

3.  The role of solvent viscosity in the dynamics of protein conformational changes.

Authors:  A Ansari; C M Jones; E R Henry; J Hofrichter; W A Eaton
Journal:  Science       Date:  1992-06-26       Impact factor: 47.728

4.  High-resolution study of the three-dimensional structure of horse heart metmyoglobin.

Authors:  S V Evans; G D Brayer
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

5.  The interaction of the ground and excited states of indole derivatives with electron scavengers.

Authors:  R F Steiner; E P Kirby
Journal:  J Phys Chem       Date:  1969-12

Review 6.  The control of protein stability and association by weak interactions with water: how do solvents affect these processes?

Authors:  S N Timasheff
Journal:  Annu Rev Biophys Biomol Struct       Date:  1993

7.  Alteration of sperm whale myoglobin heme axial ligation by site-directed mutagenesis.

Authors:  K D Egeberg; B A Springer; S A Martinis; S G Sligar; D Morikis; P M Champion
Journal:  Biochemistry       Date:  1990-10-23       Impact factor: 3.162

8.  Effect of unfolding on the tryptophanyl fluorescence lifetime distribution in apomyoglobin.

Authors:  E Bismuto; E Gratton; G Irace
Journal:  Biochemistry       Date:  1988-03-22       Impact factor: 3.162

9.  Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin.

Authors:  P A Jennings; P E Wright
Journal:  Science       Date:  1993-11-05       Impact factor: 47.728

10.  Extracting hydrophobic free energies from experimental data: relationship to protein folding and theoretical models.

Authors:  K A Sharp; A Nicholls; R Friedman; B Honig
Journal:  Biochemistry       Date:  1991-10-08       Impact factor: 3.162

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  68 in total

Review 1.  Folding funnels, binding funnels, and protein function.

Authors:  C J Tsai; S Kumar; B Ma; R Nussinov
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

2.  A designed four-alpha-helix bundle that binds the volatile general anesthetic halothane with high affinity.

Authors:  J S Johansson; D Scharf; L A Davies; K S Reddy; R G Eckenhoff
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

3.  Nanosecond temperature jump and time-resolved Raman study of thermal unfolding of ribonuclease A.

Authors:  K Yamamoto; Y Mizutani; T Kitagawa
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

4.  The major transition state in folding need not involve the immobilization of side chains.

Authors:  R A Staniforth; J L Dean; Q Zhong; E Zerovnik; A R Clarke; J P Waltho
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

5.  Temperature jump-induced secondary structural change of the membrane protein bacteriorhodopsin in the premelting temperature region: a nanosecond time-resolved Fourier transform infrared study.

Authors:  J Wang; M A El-Sayed
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

6.  Kinetics of local helix formation in poly-L-glutamic acid studied by time-resolved photoacoustics: neutralization reactions of carboxylates in aqueous solutions and their relevance to the problem of protein folding.

Authors:  S Abbruzzetti; C Viappiani; J R Small; L J Libertini; E W Small
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

7.  Protein motions at zero-total angular momentum: the importance of long-range correlations.

Authors:  Y Zhou; M Cook; M Karplus
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

8.  Collapse and search dynamics of apomyoglobin folding revealed by submillisecond observations of alpha-helical content and compactness.

Authors:  Takanori Uzawa; Shuji Akiyama; Tetsunari Kimura; Satoshi Takahashi; Koichiro Ishimori; Isao Morishima; Tetsuro Fujisawa
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-07       Impact factor: 11.205

9.  How fast is protein hydrophobic collapse?

Authors:  Mourad Sadqi; Lisa J Lapidus; Victor Muñoz
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-06       Impact factor: 11.205

10.  Folding lambda-repressor at its speed limit.

Authors:  Wei Yuan Yang; Martin Gruebele
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

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