Literature DB >> 8648754

Nondefective rotavirus mutants with an NSP1 gene which has a deletion of 500 nucleotides, including a cysteine-rich zinc finger motif-encoding region (nucleotides 156 to 248), or which has a nonsense codon at nucleotides 153-155.

K Taniguchi1, K Kojima, S Urasawa.   

Abstract

We isolated two nondefective bovine rotavirus mutants (A5-10 and A5-16 clones) which have nonsense mutations in the early portion of the open reading frame of the NSP1 gene. In the NSP1 gene (1,587 bases long) of A5-10, a nonsense codon is present at nucleotides 153 to 155 just upstream of the coding region (nucleotides 156 to 230) of a cysteine-rich Zn finger motif. A5-16 gene 5 (1,087 bases long) was found to have a large deletion of 500 bases corresponding to nucleotides 142 to 641 of a parent A5-10 NSP1 gene and to have a nonsense codon at nucleotides 183 to 185, which resulted from the deletion. Expression of gene 5-specific NSP1 could not be detected in MA-104 cells infected with the A5-10 or A5-16 clone or in an in vitro translation system using the plasmids with gene 5 cDNA from A5-10 or A5-16. Nevertheless, both A5-10 and A5-16 replicated well in cultured cells, although the plaque size of A5-16 was extremely small.

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Year:  1996        PMID: 8648754      PMCID: PMC190301     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  30 in total

1.  Species-specific and interspecies relatedness of NSP1 sequences in human, porcine, bovine, feline, and equine rotavirus strains.

Authors:  K Kojima; K Taniguchi; N Kobayashi
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

2.  Heterogeneity of genome rearrangements in rotaviruses isolated from a chronically infected immunodeficient child.

Authors:  F Hundley; M McIntyre; B Clark; G Beards; D Wood; I Chrystie; U Desselberger
Journal:  J Virol       Date:  1987-11       Impact factor: 5.103

3.  Nucleotide sequence and expression in Escherichia coli of the gene encoding the nonstructural protein NCVP2 of bovine rotavirus.

Authors:  M Bremont; A Charpilienne; D Chabanne; J Cohen
Journal:  Virology       Date:  1987-11       Impact factor: 3.616

4.  Distinct yearly change of serotype distribution of human rotavirus in Thailand as determined by ELISA and PCR.

Authors:  Y Pongsuwanna; K Taniguchi; F Wakasugi; Y Sutivijit; M Chiwakul; P Warachit; C Jayavasu; S Urasawa
Journal:  Epidemiol Infect       Date:  1993-10       Impact factor: 2.451

5.  Deletion mapping of the rotavirus metalloprotein NS53 (NSP1): the conserved cysteine-rich region is essential for virus-specific RNA binding.

Authors:  J Hua; X Chen; J T Patton
Journal:  J Virol       Date:  1994-06       Impact factor: 5.103

6.  The carboxyl-half of the rotavirus nonstructural protein NS53 (NSP1) is not required for virus replication.

Authors:  J Hua; J T Patton
Journal:  Virology       Date:  1994-02       Impact factor: 3.616

7.  Comparison of the rotavirus nonstructural protein NSP1 (NS53) from different species by sequence analysis and northern blot hybridization.

Authors:  S J Dunn; T L Cross; H B Greenberg
Journal:  Virology       Date:  1994-08-15       Impact factor: 3.616

8.  Survey on the distribution of the gene 4 alleles of human rotaviruses by polymerase chain reaction.

Authors:  H Wu; K Taniguchi; F Wakasugi; S Ukae; S Chiba; M Ohseto; A Hasegawa; T Urasawa; S Urasawa
Journal:  Epidemiol Infect       Date:  1994-06       Impact factor: 2.451

9.  Molecular biology of rotaviruses. IX. Conservation and divergence in genome segment 5.

Authors:  L Xu; Y Tian; O Tarlow; D Harbour; M A McCrae
Journal:  J Gen Virol       Date:  1994-12       Impact factor: 3.891

10.  Rearrangement of the VP6 gene of a group A rotavirus in combination with a point mutation affecting trimer stability.

Authors:  S Shen; B Burke; U Desselberger
Journal:  J Virol       Date:  1994-03       Impact factor: 5.103

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  30 in total

1.  Construction of an infectious cDNA clone of Aichi virus (a new member of the family Picornaviridae) and mutational analysis of a stem-loop structure at the 5' end of the genome.

Authors:  J Sasaki; Y Kusuhara; Y Maeno; N Kobayashi; T Yamashita; K Sakae; N Takeda; K Taniguchi
Journal:  J Virol       Date:  2001-09       Impact factor: 5.103

2.  Serologic and genomic characterization of a G12 human rotavirus in Thailand.

Authors:  M Wakuda; S Nagashima; N Kobayashi; Y Pongsuwanna; K Taniguchi
Journal:  J Clin Microbiol       Date:  2003-12       Impact factor: 5.948

3.  Interferon regulatory factor 3 is a cellular partner of rotavirus NSP1.

Authors:  Joel W Graff; Dana N Mitzel; Carla M Weisend; Michelle L Flenniken; Michele E Hardy
Journal:  J Virol       Date:  2002-09       Impact factor: 5.103

4.  Effect of intragenic rearrangement and changes in the 3' consensus sequence on NSP1 expression and rotavirus replication.

Authors:  J T Patton; Z Taraporewala; D Chen; V Chizhikov; M Jones; A Elhelu; M Collins; K Kearney; M Wagner; Y Hoshino; V Gouvea
Journal:  J Virol       Date:  2001-03       Impact factor: 5.103

5.  Reverse genetics system for introduction of site-specific mutations into the double-stranded RNA genome of infectious rotavirus.

Authors:  Satoshi Komoto; Jun Sasaki; Koki Taniguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-14       Impact factor: 11.205

6.  Sequence analysis demonstrates that VP6, NSP1 and NSP4 genes of Indian neonatal rotavirus strain 116E are of human origin.

Authors:  N A Cunliffe; B K Das; M Ramachandran; M K Bhan; R I Glass; J R Gentsch
Journal:  Virus Genes       Date:  1997       Impact factor: 2.332

7.  Rotavirus variant replicates efficiently although encoding an aberrant NSP3 that fails to induce nuclear localization of poly(A)-binding protein.

Authors:  Michelle M Arnold; Catie Small Brownback; Zenobia F Taraporewala; John T Patton
Journal:  J Gen Virol       Date:  2012-03-21       Impact factor: 3.891

8.  Generation of genetically stable recombinant rotaviruses containing novel genome rearrangements and heterologous sequences by reverse genetics.

Authors:  Aitor Navarro; Shane D Trask; John T Patton
Journal:  J Virol       Date:  2013-03-27       Impact factor: 5.103

9.  Rotavirus-encoded nonstructural protein 1 modulates cellular apoptotic machinery by targeting tumor suppressor protein p53.

Authors:  Rahul Bhowmick; Umesh Chandra Halder; Shiladitya Chattopadhyay; Mukti Kant Nayak; Mamta Chawla-Sarkar
Journal:  J Virol       Date:  2013-04-10       Impact factor: 5.103

10.  Rotavirus nonstructural protein 1 subverts innate immune response by inducing degradation of IFN regulatory factor 3.

Authors:  Mario Barro; John T Patton
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-01       Impact factor: 11.205

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