Literature DB >> 8647345

The Leloir pathway: a mechanistic imperative for three enzymes to change the stereochemical configuration of a single carbon in galactose.

P A Frey1.   

Abstract

The biological interconversion of galactose and glucose takes place only by way of the Leloir pathway and requires the three enzymes galactokinase, galactose-1-P uridylyltransferase, and UDP-galactose 4-epimerase. The only biological importance of these enzymes appears to be to provide for the interconversion of galactosyl and glucosyl groups. Galactose mutarotase also participates by producing the galactokinase substrate alpha-D-galactose from its beta-anomer. The galacto/gluco configurational change takes place at the level of the nucleotide sugar by an oxidation/reduction mechanism in the active site of the epimerase NAD+ complex. The nucleotide portion of UDP-galactose and UDP-glucose participates in the epimerization process in two ways: 1) by serving as a binding anchor that allows epimerization to take place at glycosyl-C-4 through weak binding of the sugar, and 2) by inducing a conformational change in the epimerase that destabilizes NAD+ and increases its reactivity toward substrates. Reversible hydride transfer is thereby facilitated between NAD+ and carbon-4 of the weakly bound sugars. The structure of the enzyme reveals many details of the binding of NAD+ and inhibitors at the active site. The essential roles of the kinase and transferase are to attach the UDP group to galactose, allowing for its participation in catalysis by the epimerase. The transferase is a Zn/Fe metalloprotein, in which the metal ions stabilize the structure rather than participating in catalysis. The structure is interesting in that it consists of single beta-sheet with 13 antiparallel strands and 1 parallel strand connected by 6 helices. The mechanism of UMP attachment at the active site of the transferase is a double displacement, with the participation of a covalent UMP-His 166-enzyme intermediate in the Escherichia coli enzyme. The evolution of this mechanism appears to have been guided by the principle of economy in the evolution of binding sites.

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Year:  1996        PMID: 8647345

Source DB:  PubMed          Journal:  FASEB J        ISSN: 0892-6638            Impact factor:   5.191


  130 in total

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Authors:  Corné H Verhees; Denise G M Koot; Thijs J G Ettema; Cor Dijkema; Willem M de Vos; John van der Oost
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2.  Hint, Fhit, and GalT: function, structure, evolution, and mechanism of three branches of the histidine triad superfamily of nucleotide hydrolases and transferases.

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Journal:  Biochemistry       Date:  2002-07-23       Impact factor: 3.162

3.  Characterization of two mutations associated with epimerase-deficiency galactosemia, by use of a yeast expression system for human UDP-galactose-4-epimerase.

Authors:  B B Quimby; A Alano; S Almashanu; A M DeSandro; T M Cowan; J L Fridovich-Keil
Journal:  Am J Hum Genet       Date:  1997-09       Impact factor: 11.025

4.  Towards a better understanding of the substrate specificity of the UDP-N-acetylglucosamine C4 epimerase WbpP.

Authors:  Melinda Demendi; Noboru Ishiyama; Joseph S Lam; Albert M Berghuis; Carole Creuzenet
Journal:  Biochem J       Date:  2005-07-01       Impact factor: 3.857

5.  Is the regulation of galactose 1-phosphate tuned against gene expression noise?

Authors:  Pedro de Atauri; David Orrell; Stephen Ramsey; Hamid Bolouri
Journal:  Biochem J       Date:  2005-04-01       Impact factor: 3.857

6.  Cloning, expression, purification, crystallization and preliminary structure determination of glucose-1-phosphate uridylyltransferase (UgpG) from Sphingomonas elodea ATCC 31461 bound to glucose-1-phosphate.

Authors:  D Aragão; A R Marques; C Frazão; F J Enguita; M A Carrondo; A M Fialho; I Sá-Correia; E P Mitchell
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-08-26

7.  Predicted functions and linkage specificities of the products of the Streptococcus pneumoniae capsular biosynthetic loci.

Authors:  David M Aanensen; Angeliki Mavroidi; Stephen D Bentley; Peter R Reeves; Brian G Spratt
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8.  Structure and function of GlmU from Mycobacterium tuberculosis.

Authors:  Zhening Zhang; Esther M M Bulloch; Richard D Bunker; Edward N Baker; Christopher J Squire
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-02-20

9.  The Xbp1s/GalE axis links ER stress to postprandial hepatic metabolism.

Authors:  Yingfeng Deng; Zhao V Wang; Caroline Tao; Ningguo Gao; William L Holland; Anwarul Ferdous; Joyce J Repa; Guosheng Liang; Jin Ye; Mark A Lehrman; Joseph A Hill; Jay D Horton; Philipp E Scherer
Journal:  J Clin Invest       Date:  2012-12-21       Impact factor: 14.808

10.  Characterization, expression, and mutation of the Lactococcus lactis galPMKTE genes, involved in galactose utilization via the Leloir pathway.

Authors:  Benoît P Grossiord; Evert J Luesink; Elaine E Vaughan; Alain Arnaud; Willem M de Vos
Journal:  J Bacteriol       Date:  2003-02       Impact factor: 3.490

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