Literature DB >> 8646540

The structure of Desulfovibrio vulgaris rubrerythrin reveals a unique combination of rubredoxin-like FeS4 and ferritin-like diiron domains.

F deMaré1, D M Kurtz, P Nordlund.   

Abstract

We have determined the structure of rubrerythrin, a non-haem iron protein from the anaerobic sulphate-reducing bacterium, Desulfovibrio vulgaris (Hildenborough), by X-ray crystallography. The structure reveals a tetramer of two-domain subunits. Each subunit contains a four-helix bundle surrounding a diiron-oxo site and a C-terminal rubredoxin-like FeS4 domain. The diiron-oxo site contains a larger number of carboxylate ligands and a higher degree of solvent exposure than do those in other diiron-oxo proteins. The four-helix bundle of rubrerythrin closely resembles those of the ferritin and bacterioferritin subunits, suggesting a relationship among these proteins-consistent with the recently demonstrated ferroxidase activity of rubrerythrin.

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Year:  1996        PMID: 8646540     DOI: 10.1038/nsb0696-539

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  31 in total

1.  A rubrerythrin operon and nigerythrin gene in Desulfovibrio vulgaris (Hildenborough).

Authors:  H L Lumppio; N V Shenvi; R P Garg; A O Summers; D M Kurtz
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

2.  Mapping protein pockets through their potential small-molecule binding volumes: QSCD applied to biological protein structures.

Authors:  Keith Mason; Nehal M Patel; Aric Ledel; Ciamac C Moallemi; Edward A Wintner
Journal:  J Comput Aided Mol Des       Date:  2004-01       Impact factor: 3.686

3.  The crystal structure of the E. coli stress protein YciF.

Authors:  Aditya Hindupur; Deqian Liu; Yonghong Zhao; Henry D Bellamy; Mark A White; Robert O Fox
Journal:  Protein Sci       Date:  2006-09-25       Impact factor: 6.725

4.  X-ray structure of a hydroxylase-regulatory protein complex from a hydrocarbon-oxidizing multicomponent monooxygenase, Pseudomonas sp. OX1 phenol hydroxylase.

Authors:  Matthew H Sazinsky; Pete W Dunten; Michael S McCormick; Alberto DiDonato; Stephen J Lippard
Journal:  Biochemistry       Date:  2006-12-02       Impact factor: 3.162

5.  The molecular determinants of the increased reduction potential of the rubredoxin domain of rubrerythrin relative to rubredoxin.

Authors:  Yan Luo; Can E Ergenekan; Justin T Fischer; Ming-Liang Tan; Toshiko Ichiye
Journal:  Biophys J       Date:  2010-02-17       Impact factor: 4.033

6.  Structural Characterization of Ferrous Ion Binding to Retinal Guanylate Cyclase Activator Protein 5 from Zebrafish Photoreceptors.

Authors:  Sunghyuk Lim; Alexander Scholten; Grace Manchala; Diana Cudia; Sarah-Karina Zlomke-Sell; Karl-W Koch; James B Ames
Journal:  Biochemistry       Date:  2017-12-07       Impact factor: 3.162

Review 7.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

8.  Five-gene cluster in Clostridium thermoaceticum consisting of two divergent operons encoding rubredoxin oxidoreductase- rubredoxin and rubrerythrin-type A flavoprotein- high-molecular-weight rubredoxin.

Authors:  A Das; E D Coulter; D M Kurtz; L G Ljungdahl
Journal:  J Bacteriol       Date:  2001-03       Impact factor: 3.490

Review 9.  Iron-sulfur protein folds, iron-sulfur chemistry, and evolution.

Authors:  Jacques Meyer
Journal:  J Biol Inorg Chem       Date:  2007-11-09       Impact factor: 3.358

Review 10.  Ferritins, iron uptake and storage from the bacterioferritin viewpoint.

Authors:  Maria Arménia Carrondo
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

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