Literature DB >> 8643494

Crystal structure of a human TATA box-binding protein/TATA element complex.

D B Nikolov1, H Chen, E D Halay, A Hoffman, R G Roeder, S K Burley.   

Abstract

The TATA box-binding protein (TBP) is required by all three eukaryotic RNA polymerases for correct initiation of transcription of ribosomal, messenger, small nuclear, and transfer RNAs. The cocrystal structure of the C-terminal/core region of human TBP complexed with the TATA element of the adenovirus major late promoter has been determined at 1.9 angstroms resolution. Structural and functional analyses of the protein-DNA complex are presented, with a detailed comparison to our 1.9-angstroms resolution structure of Arabidopsis thaliana TBP2 bound to the same TATA box.

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Year:  1996        PMID: 8643494      PMCID: PMC39370          DOI: 10.1073/pnas.93.10.4862

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Improved methods for building protein models in electron density maps and the location of errors in these models.

Authors:  T A Jones; J Y Zou; S W Cowan; M Kjeldgaard
Journal:  Acta Crystallogr A       Date:  1991-03-01       Impact factor: 2.290

Review 2.  The complexities of eukaryotic transcription initiation: regulation of preinitiation complex assembly.

Authors:  R G Roeder
Journal:  Trends Biochem Sci       Date:  1991-11       Impact factor: 13.807

Review 3.  RNA polymerase III (C) and its transcription factors.

Authors:  O S Gabrielsen; A Sentenac
Journal:  Trends Biochem Sci       Date:  1991-11       Impact factor: 13.807

4.  Use of T7 RNA polymerase to direct expression of cloned genes.

Authors:  F W Studier; A H Rosenberg; J J Dunn; J W Dubendorff
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

5.  Defining the structure of irregular nucleic acids: conventions and principles.

Authors:  R Lavery; H Sklenar
Journal:  J Biomol Struct Dyn       Date:  1989-02

6.  Yeast and human TATA-binding proteins have nearly identical DNA sequence requirements for transcription in vitro.

Authors:  C R Wobbe; K Struhl
Journal:  Mol Cell Biol       Date:  1990-08       Impact factor: 4.272

7.  Five intermediate complexes in transcription initiation by RNA polymerase II.

Authors:  S Buratowski; S Hahn; L Guarente; P A Sharp
Journal:  Cell       Date:  1989-02-24       Impact factor: 41.582

8.  Multiple factors required for accurate initiation of transcription by purified RNA polymerase II.

Authors:  T Matsui; J Segall; P A Weil; R G Roeder
Journal:  J Biol Chem       Date:  1980-12-25       Impact factor: 5.157

9.  TBP binding to the TATA box induces a specific downstream unwinding site that is targeted by pluramycin.

Authors:  D Sun; L H Hurley
Journal:  Chem Biol       Date:  1995-07

10.  Highly conserved core domain and unique N terminus with presumptive regulatory motifs in a human TATA factor (TFIID).

Authors:  A Hoffman; E Sinn; T Yamamoto; J Wang; A Roy; M Horikoshi; R G Roeder
Journal:  Nature       Date:  1990-07-26       Impact factor: 49.962

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  84 in total

1.  Orientation of the transcription preinitiation complex in archaea.

Authors:  S D Bell; P L Kosa; P B Sigler; S P Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  The structural basis for the oriented assembly of a TBP/TFB/promoter complex.

Authors:  O Littlefield; Y Korkhin; P B Sigler
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

3.  DNA bending by an adenine--thymine tract and its role in gene regulation.

Authors:  J Hizver; H Rozenberg; F Frolow; D Rabinovich; Z Shakked
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

Review 4.  Expression of nonclassical MHC class Ib genes: comparison of regulatory elements.

Authors:  T Kevin Howcroft; Dinah S Singer
Journal:  Immunol Res       Date:  2003       Impact factor: 2.829

Review 5.  Computational approaches to identify promoters and cis-regulatory elements in plant genomes.

Authors:  Stephane Rombauts; Kobe Florquin; Magali Lescot; Kathleen Marchal; Pierre Rouzé; Yves van de Peer
Journal:  Plant Physiol       Date:  2003-07       Impact factor: 8.340

6.  TFAM forces mtDNA to make a U-turn.

Authors:  B Martin Hallberg; Nils-Göran Larsson
Journal:  Nat Struct Mol Biol       Date:  2011-11-04       Impact factor: 15.369

7.  Does TATA matter? A structural exploration of the selectivity determinants in its complexes with TATA box-binding protein.

Authors:  N Pastor; L Pardo; H Weinstein
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

8.  The human TFIID components TAF(II)135 and TAF(II)20 and the yeast SAGA components ADA1 and TAF(II)68 heterodimerize to form histone-like pairs.

Authors:  Y G Gangloff; S Werten; C Romier; L Carré; O Poch; D Moras; I Davidson
Journal:  Mol Cell Biol       Date:  2000-01       Impact factor: 4.272

9.  Minor groove deformability of DNA: a molecular dynamics free energy simulation study.

Authors:  Martin Zacharias
Journal:  Biophys J       Date:  2006-05-12       Impact factor: 4.033

10.  The cellular TATA binding protein is required for rep-dependent replication of a minimal adeno-associated virus type 2 p5 element.

Authors:  Achille François; Mickaël Guilbaud; Rafi Awedikian; Gilliane Chadeuf; Philippe Moullier; Anna Salvetti
Journal:  J Virol       Date:  2005-09       Impact factor: 5.103

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