Literature DB >> 8642597

Crystal structure of T state haemoglobin with oxygen bound at all four haems.

M Paoli1, R Liddington, J Tame, A Wilkinson, G Dodson.   

Abstract

The cooperative binding of oxygen by haemoglobin results from restraints on ligand binding in the T state. The unfavourable interactions made by the ligands at the haems destabilise the T state and favour the high affinity R state. The T <==> R equilibrium leads, in the presence of a ligand, to a rapid increase in the R state population and therefore generates cooperative binding. There is now considerable understanding of this phenomenon, but the interactions that reduce ligand affinity in the T state have not yet been fully explored, owing to the difficulties in preparing T state haemoglobin crystals in which all the subunits are oxygenated. A protocol has been developed to oxygenate deoxy T state adult human haemoglobin (HbA) crystals in air at 4 C at all four haems without significant loss of crystalline order. The X-ray crystal structure, determined to 2.1 A spacing, shows significant changes in the alpha and beta haem pockets as well as changes at the alpha(1)beta(2) interface in the direction of the R quaternary structure. Most of the shifts and deviations from deoxy T state HbA are similar to, but larger than, those previously observed in the T state met and other partially liganded T state forms. They provide clear evidence of haem-haem interaction in the T state.

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Year:  1996        PMID: 8642597     DOI: 10.1006/jmbi.1996.0124

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  38 in total

1.  High and low oxygen affinity conformations of T state hemoglobin.

Authors:  S Bruno; M Bonaccio; S Bettati; C Rivetti; C Viappiani; S Abbruzzetti; A Mozzarelli
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

2.  The X-ray structure determination of bovine carbonmonoxy hemoglobin at 2.1 A resoultion and its relationship to the quaternary structures of other hemoglobin crystal froms.

Authors:  M K Safo; D J Abraham
Journal:  Protein Sci       Date:  2001-06       Impact factor: 6.725

3.  New insights into the allosteric mechanism of human hemoglobin from molecular dynamics simulations.

Authors:  Liliane Mouawad; David Perahia; Charles H Robert; Christophe Guilbert
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

4.  Heterotropic effectors exert more significant strain on monoligated than on unligated hemoglobin.

Authors:  M Coletta; M Angeletti; I Ascone; G Boumis; A C Castellano; M Dell'Ariccia; S Della Longa; G De Sanctis; A M Priori; R Santucci; A Feis; G Amiconi
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

5.  Circular dichroism spectroscopy of tertiary and quaternary conformations of human hemoglobin entrapped in wet silica gels.

Authors:  Luca Ronda; Stefano Bruno; Cristiano Viappiani; Stefania Abbruzzetti; Andrea Mozzarelli; Kenneth C Lowe; Stefano Bettati
Journal:  Protein Sci       Date:  2006-07-05       Impact factor: 6.725

6.  Application of the PM6 method to modeling proteins.

Authors:  James J P Stewart
Journal:  J Mol Model       Date:  2008-12-10       Impact factor: 1.810

7.  Rapid reprogramming of haemoglobin structure-function exposes multiple dual-antimicrobial potencies.

Authors:  Ruijuan Du; Bow Ho; Jeak Ling Ding
Journal:  EMBO J       Date:  2009-12-17       Impact factor: 11.598

Review 8.  Hemoglobin variants: biochemical properties and clinical correlates.

Authors:  Christopher S Thom; Claire F Dickson; David A Gell; Mitchell J Weiss
Journal:  Cold Spring Harb Perspect Med       Date:  2013-03-01       Impact factor: 6.915

9.  Spontaneous quaternary and tertiary T-R transitions of human hemoglobin in molecular dynamics simulation.

Authors:  Jochen S Hub; Marcus B Kubitzki; Bert L de Groot
Journal:  PLoS Comput Biol       Date:  2010-05-06       Impact factor: 4.475

10.  A combinatorial approach to detect coevolved amino acid networks in protein families of variable divergence.

Authors:  Julie Baussand; Alessandra Carbone
Journal:  PLoS Comput Biol       Date:  2009-09-04       Impact factor: 4.475

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