Literature DB >> 8624418

Sherpa: a Macintosh-based expert system for the interpretation of electrospray ionization LC/MS and MS/MS data from protein digests.

J A Taylor1, K A Walsh, R S Johnson.   

Abstract

A computer program, Sherpa, has been implemented to aid in the elucidation of electrospray ionization liquid chromatography/mass spectrometry (LC/MS) and tandem mass spectrometry data from protein digests. The program differs from existing analysis software in its ability to search concurrently against multiple protein sequences, to search and compare two LC/MS files concurrently, to search for glycosylated and phosphorylated peptides, and to give a simple evaluation of the quality of a match between the data and a prediction.

Entities:  

Mesh：

Substances：

Year:  1996        PMID： 8624418     DOI： 10.1002/(SICI)1097-0231(199604)10:6<679::AID-RCM528>3.0.CO;2-Q

Source DB:  PubMed          Journal:  Rapid Commun Mass Spectrom        ISSN： 0951-4198            Impact factor:   2.419


  8 in total

1.  Locating and identifying posttranslational modifications by in-source decay during MALDI-TOF mass spectrometry.

Authors:  J J Lennon; K A Walsh
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

2.  Gamma 2 subunit of G protein heterotrimer is an N-end rule ubiquitylation substrate.

Authors:  Maria H Hamilton; Lana A Cook; Theodore R McRackan; Kevin L Schey; John D Hildebrandt
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-16       Impact factor: 11.205

3.  Genome-based peptide fingerprint scanning.

Authors:  Michael C Giddings; Atul A Shah; Ray Gesteland; Barry Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

4.  Identification of a region in G protein gamma subunits conserved across species but hypervariable among subunit isoforms.

Authors:  L A Cook; K L Schey; J H Cleator; M D Wilcox; J Dingus; J D Hildebrandt
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

5.  Identification of the major site of O-linked beta-N-acetylglucosamine modification in the C terminus of insulin receptor substrate-1.

Authors:  Lauren E Ball; Mary N Berkaw; Maria G Buse
Journal:  Mol Cell Proteomics       Date:  2005-10-22       Impact factor: 5.911

6.  Pivotal role of computers and software in mass spectrometry - SEQUEST and 20 years of tandem MS database searching.

Authors:  John R Yates
Journal:  J Am Soc Mass Spectrom       Date:  2015-08-19       Impact factor: 3.109

7.  Liquid chromatography and electrospray mass spectrometric mapping of peptides from human plasma filtrate.

Authors:  M Raida; P Schulz-Knappe; G Heine; W G Forssmann
Journal:  J Am Soc Mass Spectrom       Date:  1999-01       Impact factor: 3.109

8.  Monitoring calcium-induced conformational changes in recoverin by electrospray mass spectrometry.

Authors:  T A Neubert; K A Walsh; J B Hurley; R S Johnson
Journal:  Protein Sci       Date:  1997-04       Impact factor: 6.725
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.