Literature DB >> 8623520

The Escherichia coli retrons Ec67 and Ec86 replace DNA between the cos site and a transcription terminator of a 186-related prophage.

I B Dodd1, J B Egan.   

Abstract

Retrons are unusual, reverse transcriptase-encoding elements found in bacteria. Although there are a number of indications that retrons are mobile elements, their transposition has not been observed. The Escherichia coli retrons Ec67 and Ec86 are different retrons inserted at the same site and we have further characterized this site in search of clues to the mechanism of retron transposition. We confirm, by extending previous sequence analysis, that Ec67 and Ec86 are inserted into prophages related to coliphage 186. Comparison with the recently published sequence of the 186 96-2% region indicates that the retrons have replaced approximately 180 bp of DNA between the phage cohesive end site (cos) and the transcription terminator of a phage DNA-packaging gene. These features--DNA replacement at the insertion site and the location of retron junctions near transcription terminators or DNA cleavage sites--are shared with other retrons and suggest ways in which retron transposition might have occurred.

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Year:  1996        PMID: 8623520     DOI: 10.1006/viro.1996.0228

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  11 in total

Review 1.  Prophage genomics.

Authors:  Carlos Canchaya; Caroline Proux; Ghislain Fournous; Anne Bruttin; Harald Brüssow
Journal:  Microbiol Mol Biol Rev       Date:  2003-06       Impact factor: 11.056

2.  Control of directionality in integrase-mediated recombination: examination of recombination directionality factors (RDFs) including Xis and Cox proteins.

Authors:  J A Lewis; G F Hatfull
Journal:  Nucleic Acids Res       Date:  2001-06-01       Impact factor: 16.971

3.  Low-molecular-weight plasmid of Salmonella enterica serovar Enteritidis codes for retron reverse transcriptase and influences phage resistance.

Authors:  I Rychlik; A Sebkova; D Gregorova; R Karpiskova
Journal:  J Bacteriol       Date:  2001-05       Impact factor: 3.490

4.  The virulence plasmid-encoded impCAB operon enhances survival and induced mutagenesis in Shigella flexneri after exposure to UV radiation.

Authors:  L J Runyen-Janecky; M Hong; S M Payne
Journal:  Infect Immun       Date:  1999-03       Impact factor: 3.441

5.  Genomic characterization of Ralstonia solanacearum phage phiRSA1 and its related prophage (phiRSX) in strain GMI1000.

Authors:  Akiko Fujiwara; Takeru Kawasaki; Shoji Usami; Makoto Fujie; Takashi Yamada
Journal:  J Bacteriol       Date:  2007-10-26       Impact factor: 3.490

6.  Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7.

Authors:  Derek Pickard; John Wain; Stephen Baker; Alexandra Line; Sonia Chohan; Maria Fookes; Andrew Barron; Peadar O Gaora; José A Chabalgoity; Niren Thanky; Christoph Scholes; Nicholas Thomson; Michael Quail; Julian Parkhill; Gordon Dougan
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

Review 7.  Bacterial genome instability.

Authors:  Elise Darmon; David R F Leach
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

8.  Lysogenic Conversion of the Phytopathogen Ralstonia solanacearum by the P2virus ϕRSY1.

Authors:  Ahmed Askora; Takeru Kawasaki; Makoto Fujie; Takashi Yamada
Journal:  Front Microbiol       Date:  2017-11-14       Impact factor: 5.640

Review 9.  Retrons and their applications in genome engineering.

Authors:  Anna J Simon; Andrew D Ellington; Ilya J Finkelstein
Journal:  Nucleic Acids Res       Date:  2019-12-02       Impact factor: 16.971

10.  The Acquisition of Colistin Resistance Is Associated to the Amplification of a Large Chromosomal Region in Klebsiella pneumoniae kp52145.

Authors:  María Blanca Sánchez; Alicia Sánchez-Gorostiaga; Trinidad Cuesta; José Luis Martínez
Journal:  Int J Mol Sci       Date:  2021-01-11       Impact factor: 5.923

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