Literature DB >> 8612648

Stereochemical course and reaction products of the action of beta-xylosidase from Thermoanaerobacterium saccharolyticum strain B6A-RI.

S Armand1, C Vieille, C Gey, A Heyraud, J G Zeikus, B Henrissat.   

Abstract

Beta-Xylosidases are grouped in families 39 and 43 of a general classification of glycosyl hydrolases based on amino acid sequence similarities. The Beta-xylosidase from Butyrivibrio fibrisolvens, which belongs to family 43, has been shown to operate by a molecular mechanism which results in the inversion of the anomeric configuration. Thermoanaerobacterium saccharolyticum B6A-RI Beta-xylosidase which belongs to family 39 was purified as a recombinant enzyme from Escherichia coli. The stereochemistry of the hydrolysis of p-nitrophenyl Beta-D-xylopyranoside was followed by 1H NMR. The spectrum recorded after 2 h hydrolysis showed a large signal centred at 4.47 ppm (J approximately 10 Hz) assignable to H1 of free Beta-xylose with a small amount of alpha-xylose (5.05 ppm, J approximately 3 Hz) attributable to mutarotation. This result indicates that T. saccharolyticum Beta-xylosidase operates with overall retention of the anomeric configuration. This result, with the lack of sequence similarity between the two families of Beta-xylosidases, suggests that these two families have major differences in their active-site geometries. Consistent with its retaining mechanism, Beta-xylosidase of T. saccharolyticum B6A-RI also displayed transglycosylating activity:reverse-phase HPLC showed approximately 30% conversion of p-nitrophenyl Beta-D-xylopyranoside into a number of higher nitrophenyl oligosaccharides after 5 min incubation with the enzyme. The structure of the most abundant oligosaccharides could be determined by total correlation spectroscopy NMR and showed that the enzyme can build Beta-1,4, Beta-1,3- and Beta-1,2-linked xylo-oligosaccharides.

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Year:  1996        PMID: 8612648     DOI: 10.1111/j.1432-1033.1996.00706.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  5 in total

Review 1.  Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability.

Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

2.  Biochemical characterization and mechanism of action of a thermostable beta-glucosidase purified from Thermoascus aurantiacus.

Authors:  N J Parry; D E Beever; E Owen; I Vandenberghe; J Van Beeumen ; M K Bhat
Journal:  Biochem J       Date:  2001-01-01       Impact factor: 3.857

3.  Identification of glu-277 as the catalytic nucleophile of Thermoanaerobacterium saccharolyticum beta-xylosidase using electrospray MS.

Authors:  D J Vocadlo; L F MacKenzie; S He; G J Zeikus; S G Withers
Journal:  Biochem J       Date:  1998-10-15       Impact factor: 3.857

4.  Biochemical and kinetic characterisation of a novel xylooligosaccharide-upregulated GH43 β-d-xylosidase/α-l-arabinofuranosidase (BXA43) from the probiotic Bifidobacterium animalis subsp. lactis BB-12.

Authors:  Alexander Holm Viborg; Kim Ib Sørensen; Ofir Gilad; Daniel Bisgaard Steen-Jensen; Adiphol Dilokpimol; Susanne Jacobsen; Birte Svensson
Journal:  AMB Express       Date:  2013-09-11       Impact factor: 3.298

5.  Insights into mucopolysaccharidosis I from the structure and action of α-L-iduronidase.

Authors:  Haiying Bie; Jiang Yin; Xu He; Allison R Kermode; Ethan D Goddard-Borger; Stephen G Withers; Michael N G James
Journal:  Nat Chem Biol       Date:  2013-09-11       Impact factor: 15.040

  5 in total

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