Literature DB >> 8605632

A potent new mode of beta-lactamase inhibition revealed by the 1.7 A X-ray crystallographic structure of the TEM-1-BLIP complex.

N C Strynadka1, S E Jensen, P M Alzari, M N James.   

Abstract

The structure of TEM-1 beta-lactamase complex with the inhibitor BLIP has been determined at 1.7 angstrom resolution. The two tandemly repeated domains of BLIP form a polar, concave surface that docks onto a predominantly polar, convex protrusion on the enzyme. The ability of BLIP to adapt to a variety of class A beta-lactamases is most likely due to an observed flexibility between the two domains of the inhibitor and to an extensive layer of water molecules entrapped between the enzyme and inhibitor. A beta-hairpin loop from domain 1 of BLIP is inserted into the active site of the beta-lactamase. The carboxylate of Asp 49 forms hydrogen bonds to four conserved, catalytic residues in the beta-lactamase, thereby mimicking the position of the penicillin G carboxylate observed in the acyl-enzyme complex of TEM-1 with substrate. This beta-hairpin may serve as a template with which to create a new family of peptide-analogue beta-lactamase inhibitors.

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Year:  1996        PMID: 8605632     DOI: 10.1038/nsb0396-290

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  38 in total

1.  Binding properties of a peptide derived from beta-lactamase inhibitory protein.

Authors:  G W Rudgers; W Huang; T Palzkill
Journal:  Antimicrob Agents Chemother       Date:  2001-12       Impact factor: 5.191

2.  Soft protein-protein docking in internal coordinates.

Authors:  Juan Fernández-Recio; Maxim Totrov; Ruben Abagyan
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

3.  Electrostatics in protein-protein docking.

Authors:  Alexander Heifetz; Ephraim Katchalski-Katzir; Miriam Eisenstein
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

4.  Protein-protein docking with multiple residue conformations and residue substitutions.

Authors:  David M Lorber; Maria K Udo; Brian K Shoichet
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

5.  Resistance to beta-lactamase inhibitor protein does not parallel resistance to clavulanic acid in TEM beta-lactamase mutants.

Authors:  William A Schroeder; Troy R Locke; Susan E Jensen
Journal:  Antimicrob Agents Chemother       Date:  2002-11       Impact factor: 5.191

6.  Identification and characterization of beta-lactamase inhibitor protein-II (BLIP-II) interactions with beta-lactamases using phage display.

Authors:  N G Brown; T Palzkill
Journal:  Protein Eng Des Sel       Date:  2010-03-22       Impact factor: 1.650

Review 7.  Protein binding specificity versus promiscuity.

Authors:  Gideon Schreiber; Amy E Keating
Journal:  Curr Opin Struct Biol       Date:  2010-11-09       Impact factor: 6.809

8.  The modular architecture of protein-protein binding interfaces.

Authors:  D Reichmann; O Rahat; S Albeck; R Meged; O Dym; G Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-23       Impact factor: 11.205

9.  Action-at-a-distance interactions enhance protein binding affinity.

Authors:  Brian A Joughin; David F Green; Bruce Tidor
Journal:  Protein Sci       Date:  2005-03-31       Impact factor: 6.725

10.  Engineering Specificity from Broad to Narrow: Design of a β-Lactamase Inhibitory Protein (BLIP) Variant That Exclusively Binds and Detects KPC β-Lactamase.

Authors:  Dar-Chone Chow; Kacie Rice; Wanzhi Huang; Robert L Atmar; Timothy Palzkill
Journal:  ACS Infect Dis       Date:  2016-10-26       Impact factor: 5.084

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