Literature DB >> 8600444

RFX proteins, a novel family of DNA binding proteins conserved in the eukaryotic kingdom.

P Emery1, B Durand, B Mach, W Reith.   

Abstract

Until recently, the RFX family of DNA binding proteins consisted exclusively of four mammalian members (RFX1-RFX4) characterized by a novel highly conserved DNA binding domain. Strong conservation of this DNA binding domain precluded a precise definition of the motif required for DNA binding. In addition, the biological systems in which these RFX proteins are implicated remained obscure. The recent identification of four new RFX genes has now shed light on the evolutionary conservation of the RFX family, contributed greatly to a detailed characterization of the RFX DNA binding motif, and provided clear evidence for the function of some of the RFX proteins. RFX proteins have been conserved throughout evolution in a wide variety of species, including Saccharomyces cerevisiae, Schizosaccharomyces pombe, Caenorhabditis elegans, mouse and man. The characteristic RFX DNA binding motif has been recruited into otherwise very divergent regulatory factors functioning in a diverse spectrum of unrelated systems, including regulation of the mitotic cell cycle in fission yeast, the control of the immune response in mammals, and infection by human hepatitis B virus.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8600444      PMCID: PMC145730          DOI: 10.1093/nar/24.5.803

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  17 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

Review 3.  Molecular defects in the bare lymphocyte syndrome and regulation of MHC class II genes.

Authors:  W Reith; V Steimle; B Mach
Journal:  Immunol Today       Date:  1995-11

Review 4.  MHC class II-deficient combined immunodeficiency: a disease of gene regulation.

Authors:  B Mach; V Steimle; W Reith
Journal:  Immunol Rev       Date:  1994-04       Impact factor: 12.988

5.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

6.  Interaction of EF-C/RFX-1 with the inverted repeat of viral enhancer regions is required for transactivation.

Authors:  E David; A D Garcia; P Hearing
Journal:  J Biol Chem       Date:  1995-04-07       Impact factor: 5.157

7.  Congenital immunodeficiency with a regulatory defect in MHC class II gene expression lacks a specific HLA-DR promoter binding protein, RF-X.

Authors:  W Reith; S Satola; C H Sanchez; I Amaldi; B Lisowska-Grospierre; C Griscelli; M R Hadam; B Mach
Journal:  Cell       Date:  1988-06-17       Impact factor: 41.582

8.  The myc intron-binding polypeptide associates with RFX1 in vivo and binds to the major histocompatibility complex class II promoter region, to the hepatitis B virus enhancer, and to regulatory regions of several distinct viral genes.

Authors:  W Reinhold; L Emens; A Itkes; M Blake; I Ichinose; M Zajac-Kaye
Journal:  Mol Cell Biol       Date:  1995-06       Impact factor: 4.272

9.  The relative contributions of various transcription factors to the overall promoter strength of the mouse ribosomal protein L30 gene.

Authors:  G Sáfrány; R P Perry
Journal:  Eur J Biochem       Date:  1995-06-15

10.  A novel DNA-binding regulatory factor is mutated in primary MHC class II deficiency (bare lymphocyte syndrome).

Authors:  V Steimle; B Durand; E Barras; M Zufferey; M R Hadam; B Mach; W Reith
Journal:  Genes Dev       Date:  1995-05-01       Impact factor: 11.361

View more
  75 in total

1.  Dimeric RFX proteins contribute to the activity and lineage specificity of the interleukin-5 receptor alpha promoter through activation and repression domains.

Authors:  A Iwama; J Pan; P Zhang; W Reith; B Mach; D G Tenen; Z Sun
Journal:  Mol Cell Biol       Date:  1999-06       Impact factor: 4.272

2.  Functional specialization of sensory cilia by an RFX transcription factor isoform.

Authors:  Juan Wang; Hillel T Schwartz; Maureen M Barr
Journal:  Genetics       Date:  2010-10-05       Impact factor: 4.562

Review 3.  Novel mechanisms of class II major histocompatibility complex gene regulation.

Authors:  Michael Radosevich; Santa Jeremy Ono
Journal:  Immunol Res       Date:  2003       Impact factor: 2.829

4.  Characterization of dRFX2, a novel RFX family protein in Drosophila.

Authors:  Kyoko Otsuki; Yuko Hayashi; Masaki Kato; Hideki Yoshida; Masamitsu Yamaguchi
Journal:  Nucleic Acids Res       Date:  2004-10-19       Impact factor: 16.971

5.  An Expanded Role for the RFX Transcription Factor DAF-19, with Dual Functions in Ciliated and Nonciliated Neurons.

Authors:  Elizabeth A De Stasio; Katherine P Mueller; Rosemary J Bauer; Alexander J Hurlburt; Sophie A Bice; Sophie L Scholtz; Prasad Phirke; Debora Sugiaman-Trapman; Loraina A Stinson; Haili B Olson; Savannah L Vogel; Zabdiel Ek-Vazquez; Yagmur Esemen; Jessica Korzynski; Kelsey Wolfe; Bonnie N Arbuckle; He Zhang; Gaelen Lombard-Knapp; Brian P Piasecki; Peter Swoboda
Journal:  Genetics       Date:  2018-01-03       Impact factor: 4.562

6.  The transcriptional activation and repression domains of RFX1, a context-dependent regulator, can mutually neutralize their activities.

Authors:  Y Katan; R Agami; Y Shaul
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

7.  Regulatory factor X1 is a new tumor suppressive transcription factor that acts via direct downregulation of CD44 in glioblastoma.

Authors:  Chenzhuo Feng; Ying Zhang; Jinbo Yin; Jun Li; Roger Abounader; Zhiyi Zuo
Journal:  Neuro Oncol       Date:  2014-02-12       Impact factor: 12.300

8.  Molecular genetic analysis of the yeast repressor Rfx1/Crt1 reveals a novel two-step regulatory mechanism.

Authors:  Zhengjian Zhang; Joseph C Reese
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

9.  Convergent evolution of RFX transcription factors and ciliary genes predated the origin of metazoans.

Authors:  Jeffrey S C Chu; David L Baillie; Nansheng Chen
Journal:  BMC Evol Biol       Date:  2010-05-04       Impact factor: 3.260

10.  RFX2 is a candidate downstream amplifier of A-MYB regulation in mouse spermatogenesis.

Authors:  Gary C Horvath; Malathi K Kistler; W Stephen Kistler
Journal:  BMC Dev Biol       Date:  2009-12-09       Impact factor: 1.978

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.