Literature DB >> 8599759

Pseudocontact shifts used in the restraint of the solution structures of electron transfer complexes.

R D Guiles1, S Sarma, R J DiGate, D Banville, V J Basus, I D Kuntz, L Waskell.   

Abstract

The geometry of the ferricytochrome b5-ferricytochrome c complex has been analysed using long-range interprotein paramagnetic dipolar shifts. Heteronuclear filtered NMR spectra of samples containing 15N-labelled cytochrome b5 in complex with unlabelled cytochrome c allowed unambiguous assessment of pseudocontact shifts relative to diamagnetic reference states. Because pseudocontact shifts can be observed for protons as much as 20 A from the paramagnetic centre, this approach allows study of electron transfer proteins in fast exchange. Our findings provide the first physical evidence confirming hypotheses presented in previous theoretical studies. This absence of certain predicted shifts that are expected based on the best fit to a static model of the complex suggests that cytochrome b5 is more dynamic in solution than in the crystal, in agreement with molecular dynamics simulations.

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Year:  1996        PMID: 8599759     DOI: 10.1038/nsb0496-333

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  11 in total

1.  The use of chemical shift temperature gradients to establish the paramagnetic susceptibility tensor orientation: implication for structure determination/refinement in paramagnetic metalloproteins.

Authors:  Z Xia; B D Nguyen; G N La Mar
Journal:  J Biomol NMR       Date:  2000-06       Impact factor: 2.835

2.  A further investigation of the cytochrome b5-cytochrome c complex.

Authors:  Lucia Banci; Ivano Bertini; Isabella C Felli; Ludwig Krippahl; Karel Kubicek; José J G Moura; Antonio Rosato
Journal:  J Biol Inorg Chem       Date:  2003-07-19       Impact factor: 3.358

3.  Epitope mapping for the monoclonal antibody that inhibits intramolecular electron transfer in flavocytochrome b2.

Authors:  K H Diêp Lê; Martine Mayer; Florence Lederer
Journal:  Biochem J       Date:  2003-07-01       Impact factor: 3.857

4.  Side chain mobility as monitored by CH-CH cross correlation: the example of cytochrome b5.

Authors:  L Banci; I Bertini; I C Felli; P Hajieva; M S Viezzoli
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

5.  N epsilon,N epsilon-dimethyl-lysine cytochrome c as an NMR probe for lysine involvement in protein-protein complex formation.

Authors:  G R Moore; M C Cox; D Crowe; M J Osborne; F I Rosell; J Bujons; P D Barker; M R Mauk; A G Mauk
Journal:  Biochem J       Date:  1998-06-01       Impact factor: 3.857

Review 6.  Structural biology of redox partner interactions in P450cam monooxygenase: a fresh look at an old system.

Authors:  Irina F Sevrioukova; Thomas L Poulos
Journal:  Arch Biochem Biophys       Date:  2010-09-15       Impact factor: 4.013

7.  Structural determination of biomolecular interfaces by nuclear magnetic resonance of proteins with reduced proton density.

Authors:  Fabien Ferrage; Kaushik Dutta; Alexander Shekhtman; David Cowburn
Journal:  J Biomol NMR       Date:  2010-04-07       Impact factor: 2.835

8.  The orientations of cytochrome c in the highly dynamic complex with cytochrome b5 visualized by NMR and docking using HADDOCK.

Authors:  Alexander N Volkov; Davide Ferrari; Jonathan A R Worrall; Alexandre M J J Bonvin; Marcellus Ubbink
Journal:  Protein Sci       Date:  2005-02-02       Impact factor: 6.725

9.  Zinc-substituted Desulfovibrio gigas desulforedoxins: resolving subunit degeneracy with nonsymmetric pseudocontact shifts.

Authors:  Brian J Goodfellow; Sofia G Nunes; Frank Rusnak; Isabel Moura; Carla Ascenso; José J G Moura; Brian F Volkman; John L Markley
Journal:  Protein Sci       Date:  2002-10       Impact factor: 6.725

10.  Characterization and calculation of a cytochrome c-cytochrome b5 complex using NMR data.

Authors:  Shashank Deep; Sang-Choul Im; Erik R P Zuiderweg; Lucy Waskell
Journal:  Biochemistry       Date:  2005-08-09       Impact factor: 3.162

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