Literature DB >> 8595673

Sorghum mitochondrial orf25 and a related chimeric configuration of a male-sterile cytoplasm.

H Van Tang1, D R Pring, F R Muza, B Yan.   

Abstract

We describe fundamental characteristics of sorghum mitochondrial orf25, urf209, and a related chimeric configuration, orf265/130, which is restricted to the IS1112C source of cytoplasmic male sterility in sorghum. Transcripts of urf209 are edited at ten nucleotides, resulting in nine amino-acid changes predicted from genomic sequences. The cDNA-predicted polypeptide product is 23.6 kDa, while Western blot analyses identify a product of 20k Da. Transcription of urf209 is characterized by one or two transcripts, dependent on nuclear background, but this difference is not related to male fertility status. The orf265/130 chimeric region includes 288 bp 95% identical to sequences 5' to maize T-cytoplasm T-urf13 and atp6, which includes a common transcription initiation site, and terminates with a recombinational event involving urf209. The urf209 similarity extends 189 bp, followed by sequences duplicated 5' to sorghum atp6-2. Sequences immediately 3' to the atp6-2 similarity include a second in-frame start codon, defining orf130. Structural features 5' to orf130 are shared with motifs found 5' to several translated mitochondrial open reading frames. The orf265/orf130 configuration is uniquely transcribed, and transcripts of orf130 exhibit one silent RNA editing event. Transcription in somatic cells is not altered by male fertility status.

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Year:  1996        PMID: 8595673     DOI: 10.1007/bf02221557

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  41 in total

1.  Sequence and transcript analysis of the Nco2.5 Ogura-specific fragment correlated with cytoplasmic male sterility in Brassica cybrids.

Authors:  S Bonhomme; F Budar; D Lancelin; I Small; M C Defrance; G Pelletier
Journal:  Mol Gen Genet       Date:  1992-11

2.  Characterization of the wheat mitochondrial orf25 gene.

Authors:  L Bonen; S Bird; L Belanger
Journal:  Plant Mol Biol       Date:  1990-11       Impact factor: 4.076

3.  The ATPase subunit 6 gene of tobacco mitochondria contains an unusual sequence.

Authors:  M M Bland; C S Levings; D F Matzinger
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

4.  Purification of plant mitochondria by isopycnic centrifugation in density gradients of Percoll.

Authors:  M Neuburger; E P Journet; R Bligny; J P Carde; R Douce
Journal:  Arch Biochem Biophys       Date:  1982-08       Impact factor: 4.013

5.  Sorghum mitochondrial atp6: divergent amino extensions to a conserved core polypeptide.

Authors:  J A Mullen; D R Pring; F Kempken; J Ferguson; C D Chase
Journal:  Plant Mol Biol       Date:  1992-10       Impact factor: 4.076

6.  A chloroplast DNA deletion located in RNA polymerase gene rpoC2 in CMS lines of sorghum.

Authors:  Z Chen; S Muthukrishnan; G H Liang; K F Schertz; G E Hart
Journal:  Mol Gen Genet       Date:  1993-01

7.  Conserved sequence blocks 5' to start codons of plant mitochondrial genes.

Authors:  D R Pring; J A Mullen; F Kempken
Journal:  Plant Mol Biol       Date:  1992-05       Impact factor: 4.076

8.  Editing of kinetoplastid mitochondrial mRNAs by uridine addition and deletion generates conserved amino acid sequences and AUG initiation codons.

Authors:  J M Shaw; J E Feagin; K Stuart; L Simpson
Journal:  Cell       Date:  1988-05-06       Impact factor: 41.582

9.  The nad4L gene is encoded between exon c of nad5 and orf25 in the Arabidopsis mitochondrial genome.

Authors:  P Brandt; S Sünkel; M Unseld; A Brennicke; V Knoop
Journal:  Mol Gen Genet       Date:  1992-12

10.  The NCS3 mutation: genetic evidence for the expression of ribosomal protein genes in Zea mays mitochondria.

Authors:  M D Hunt; K J Newton
Journal:  EMBO J       Date:  1991-05       Impact factor: 11.598

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  2 in total

1.  Transcription initiation sites for sorghum mitochondrial atp9 are positioned immediately 3' to trnfM.

Authors:  B Yan; R A Salazar; D R Pring
Journal:  Plant Mol Biol       Date:  1997-07       Impact factor: 4.076

2.  Cosegregation of single genes associated with fertility restoration and transcript processing of sorghum mitochondrial orf107 and urf209.

Authors:  H V Tang; R Chang; D R Pring
Journal:  Genetics       Date:  1998-09       Impact factor: 4.562

  2 in total

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