Literature DB >> 8594596

Genes and proteins of Escherichia coli (GenProtEc).

M Riley1, D B Space.   

Abstract

GenProtEc is a database of Escherichia coli genes and their gene products, classified by type of function and physiological role and with citations to the literature for each. Also present are data on sequence similarities among E.coli proteins with PAM values, percent identity of amino acids, length of alignment and percent aligned. The database is available as a PKZip file by ftp from mbl.edu/pub/ecoli.exe. The program runs under MS-DOS on IMB-compatible machines. GenProtEc can also be accessed through the World Wide Web at URL http://mbl.edu/html/ecoli.html.

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Year:  1996        PMID: 8594596      PMCID: PMC145598          DOI: 10.1093/nar/24.1.40

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  4 in total

1.  Exhaustive matching of the entire protein sequence database.

Authors:  G H Gonnet; M A Cohen; S A Benner
Journal:  Science       Date:  1992-06-05       Impact factor: 47.728

2.  The SWISS-PROT protein sequence data bank, recent developments.

Authors:  A Bairoch; B Boeckmann
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

3.  Gene products of Escherichia coli: sequence comparisons and common ancestries.

Authors:  B Labedan; M Riley
Journal:  Mol Biol Evol       Date:  1995-11       Impact factor: 16.240

Review 4.  Functions of the gene products of Escherichia coli.

Authors:  M Riley
Journal:  Microbiol Rev       Date:  1993-12
  4 in total
  3 in total

1.  Compilation of DNA sequences of Escherichia coli K12: description of the interactive databases ECD and ECDC (update 1996).

Authors:  M Kröger; R Wahl
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

2.  GenProtEC: an updated and improved analysis of functions of Escherichia coli K-12 proteins.

Authors:  Margrethe H Serres; Sulip Goswami; Monica Riley
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

Review 3.  What we can learn about Escherichia coli through application of Gene Ontology.

Authors:  James C Hu; Peter D Karp; Ingrid M Keseler; Markus Krummenacker; Deborah A Siegele
Journal:  Trends Microbiol       Date:  2009-07-01       Impact factor: 17.079

  3 in total

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