Literature DB >> 8594590

MHCPEP--a database of MHC-binding peptides: update 1995.

V Brusic1, G Rudy, A P Kyne, L C Harrison.   

Abstract

MHCPEP is a curated database comprising over 6000 peptide sequences known to bind MHC molecules. Entries are compiled from published reports as well as from direct submissions of experimental data. Each entry contains peptide sequence, MHC specificity and when available, experimental method, observed activity, binding affinity, source protein, anchor positions, as well as publication references. The present format of the database allows text string matching searches but can easily be converted for use in conjunction with sequence analysis packages. The database can be accessed via Internet using Gopher, FTP or WWW.

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Year:  1996        PMID: 8594590      PMCID: PMC145587          DOI: 10.1093/nar/24.1.242

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  7 in total

1.  Nomenclature for factors of the HLA system, 1995.

Authors:  J G Bodmer; S G Marsh; E D Albert; W F Bodmer; R E Bontrop; D Charron; B Dupont; H A Erlich; B Mach; W R Mayr
Journal:  Hum Immunol       Date:  1995-06       Impact factor: 2.850

2.  Nomenclature for the major histocompatibility complexes of different species: a proposal.

Authors:  J Klein; R E Bontrop; R L Dawkins; H A Erlich; U B Gyllensten; E R Heise; P P Jones; P Parham; E K Wakeland; D I Watkins
Journal:  Immunogenetics       Date:  1990       Impact factor: 2.846

3.  SRS--an indexing and retrieval tool for flat file data libraries.

Authors:  T Etzold; P Argos
Journal:  Comput Appl Biosci       Date:  1993-02

4.  Promiscuous and allele-specific anchors in HLA-DR-binding peptides.

Authors:  J Hammer; P Valsasnini; K Tolba; D Bolin; J Higelin; B Takacs; F Sinigaglia
Journal:  Cell       Date:  1993-07-16       Impact factor: 41.582

Review 5.  MHC ligands and peptide motifs: first listing.

Authors:  H G Rammensee; T Friede; S Stevanoviíc
Journal:  Immunogenetics       Date:  1995       Impact factor: 2.846

6.  MHCPEP: a database of MHC-binding peptides.

Authors:  V Brusic; G Rudy; L C Harrison
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

7.  Specificity and promiscuity among naturally processed peptides bound to HLA-DR alleles.

Authors:  R M Chicz; R G Urban; J C Gorga; D A Vignali; W S Lane; J L Strominger
Journal:  J Exp Med       Date:  1993-07-01       Impact factor: 14.307

  7 in total
  9 in total

Review 1.  Molecular mechanisms of class I major histocompatibility complex antigen processing and presentation.

Authors:  Y Yang; P Sempé; P A Peterson
Journal:  Immunol Res       Date:  1996       Impact factor: 2.829

2.  MHCPEP, a database of MHC-binding peptides: update 1996.

Authors:  V Brusic; G Rudy; A P Kyne; L C Harrison
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

3.  Prediction of MHC class I binding peptides by a query learning algorithm based on hidden markov models.

Authors:  Keiko Udaka; Hiroshi Mamitsuka; Yukinobu Nakaseko; Naoki Abe
Journal:  J Biol Phys       Date:  2002-06       Impact factor: 1.365

4.  T-cell epitopes in type 1 diabetes autoantigen tyrosine phosphatase IA-2: potential for mimicry with rotavirus and other environmental agents.

Authors:  M C Honeyman; N L Stone; L C Harrison
Journal:  Mol Med       Date:  1998-04       Impact factor: 6.354

5.  Human B cells secrete migration inhibition factor (MIF) and present a naturally processed MIF peptide on HLA-DRB1*0405 by a FXXL motif.

Authors:  D Wymann; M Blüggel; H Kalbacher; T Blesken; C A Akdis; H E Meyer; K Blaser
Journal:  Immunology       Date:  1999-01       Impact factor: 7.397

6.  Predicting MHC class I binder: existing approaches and a novel recurrent neural network solution.

Authors:  Limin Jiang; Hui Yu; Jiawei Li; Jijun Tang; Yan Guo; Fei Guo
Journal:  Brief Bioinform       Date:  2021-11-05       Impact factor: 13.994

7.  Does rotavirus turn on type 1 diabetes?

Authors:  Leonard C Harrison; Kirsten P Perrett; Kim Jachno; Terry M Nolan; Margo C Honeyman
Journal:  PLoS Pathog       Date:  2019-10-10       Impact factor: 6.823

8.  Molecular cancer vaccines: Tumor therapy using antigen-specific immunizations.

Authors:  T Schweighoffer
Journal:  Pathol Oncol Res       Date:  1997-09       Impact factor: 2.874

9.  Prediction of functional class of proteins and peptides irrespective of sequence homology by support vector machines.

Authors:  Zhi Qun Tang; Hong Huang Lin; Hai Lei Zhang; Lian Yi Han; Xin Chen; Yu Zong Chen
Journal:  Bioinform Biol Insights       Date:  2009-11-24
  9 in total

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