Literature DB >> 8587121

Molecular evolution of the histidine biosynthetic pathway.

R Fani1, P Liò, A Lazcano.   

Abstract

The available sequences of genes encoding the enzymes associated with histidine biosynthesis suggest that this is an ancient metabolic pathway that was assembled prior to the diversification of the Bacteria, Archaea, and Eucarya. Paralogous duplications, gene elongation, and fusion events involving different his genes have played a major role in shaping this biosynthetic route. Evidence that the hisA and the hisF genes and their homologous are the result of two successive duplication events that apparently took place before the separation of the three cellular lineages is extended. These two successive gene duplication events as well as the homology between the hisH genes and the sequences encoding the TrpG-type amidotransferases support the idea that during the early stages of metabolic evolution at least parts of the histidine biosynthetic pathway were mediated by enzymes of broader substrate specificities. Maximum likelihood trees calculated for the available sequences of genes encoding these enzymes have been obtained. Their topologies support the possibility of an evolutionary proximity of archaebacteria with low GC Gram-positive bacteria. This observation is consistent with those detected by other workers using the sequences of heat-shock proteins (HSP70), glutamine synthetases, glutamate dehydrogenases, and carbamoylphosphate synthetases.

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Year:  1995        PMID: 8587121     DOI: 10.1007/bf00173156

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  80 in total

1.  An operon for histidine biosynthesis in Streptomyces coelicolor. I. Genetic evidence.

Authors:  A Carere; S Russi; M Bignami; G Sermonti
Journal:  Mol Gen Genet       Date:  1973-07-02

Review 2.  Comparative evaluation of gene expression in archaebacteria.

Authors:  W Zillig; P Palm; W D Reiter; F Gropp; G Pühler; H P Klenk
Journal:  Eur J Biochem       Date:  1988-05-02

3.  Which is the most conserved group of proteins? Homology-orthology, paralogy, xenology, and the fusion of independent lineages.

Authors:  J P Gogarten
Journal:  J Mol Evol       Date:  1994-11       Impact factor: 2.395

Review 4.  Enzyme recruitment in evolution of new function.

Authors:  R A Jensen
Journal:  Annu Rev Microbiol       Date:  1976       Impact factor: 15.500

5.  Isolation of the Candida albicans histidinol dehydrogenase (HIS4) gene and characterization of a histidine auxotroph.

Authors:  Z Altboum; S Gottlieb; G A Lebens; I Polacheck; E Segal
Journal:  J Bacteriol       Date:  1990-07       Impact factor: 3.490

6.  Structure of an ATPase operon of an acidothermophilic archaebacterium, Sulfolobus acidocaldarius.

Authors:  K Denda; J Konishi; K Hajiro; T Oshima; T Date; M Yoshida
Journal:  J Biol Chem       Date:  1990-12-15       Impact factor: 5.157

7.  Nucleotide sequence of four genes encoding ribosomal proteins from the 'S10 and spectinomycin' operon equivalent region in the archaebacterium Halobacterium marismortui.

Authors:  E Arndt
Journal:  FEBS Lett       Date:  1990-07-16       Impact factor: 4.124

8.  Imidazole glycerol phosphate synthase: the glutamine amidotransferase in histidine biosynthesis.

Authors:  T J Klem; V J Davisson
Journal:  Biochemistry       Date:  1993-05-18       Impact factor: 3.162

9.  A DNA region of 9 kbp contains all genes necessary for gas vesicle synthesis in halophilic archaebacteria.

Authors:  M Horne; C Englert; C Wimmer; F Pfeifer
Journal:  Mol Microbiol       Date:  1991-05       Impact factor: 3.501

10.  An improved host-vector system for Candida maltosa using a gene isolated from its genome that complements the his5 mutation of Saccharomyces cerevisiae.

Authors:  T Hikiji; M Ohkuma; M Takagi; K Yano
Journal:  Curr Genet       Date:  1989-10       Impact factor: 3.886

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  19 in total

1.  Divergence of function in sequence-related groups of Escherichia coli proteins.

Authors:  L A Nahum; M Riley
Journal:  Genome Res       Date:  2001-08       Impact factor: 9.043

2.  Finding evolutionary relations beyond superfamilies: fold-based superfamilies.

Authors:  Keiko Matsuda; Takaaki Nishioka; Kengo Kinoshita; Takeshi Kawabata; Nobuhiro Go
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

3.  Molecular evolution of hisB genes.

Authors:  Matteo Brilli; Renato Fani
Journal:  J Mol Evol       Date:  2004-02       Impact factor: 2.395

4.  Structural elements in IGP synthase exclude water to optimize ammonia transfer.

Authors:  Rommie E Amaro; Rebecca S Myers; V Jo Davisson; Zaida A Luthey-Schulten
Journal:  Biophys J       Date:  2005-04-22       Impact factor: 4.033

5.  Inference from proteobacterial operons shows piecewise organization: a reply to Price et al.

Authors:  R Fani; M Brilli; P Liò
Journal:  J Mol Evol       Date:  2006-09-04       Impact factor: 2.395

6.  On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common Pathway genes.

Authors:  Marco Fondi; Matteo Brilli; Renato Fani
Journal:  BMC Bioinformatics       Date:  2007-03-08       Impact factor: 3.169

7.  The evolution of histidine biosynthesis in archaea: insights into the his genes structure and organization in LUCA.

Authors:  Marco Fondi; Giovanni Emiliani; Pietro Liò; Simonetta Gribaldo; Renato Fani
Journal:  J Mol Evol       Date:  2009-11-03       Impact factor: 2.395

8.  Evolution of the structure and chromosomal distribution of histidine biosynthetic genes.

Authors:  R Fani; E Mori; E Tamburini; A Lazcano
Journal:  Orig Life Evol Biosph       Date:  1998-10       Impact factor: 1.950

Review 9.  Archaea and the prokaryote-to-eukaryote transition.

Authors:  J R Brown; W F Doolittle
Journal:  Microbiol Mol Biol Rev       Date:  1997-12       Impact factor: 11.056

10.  An aminoacyl-tRNA synthetase paralog with a catalytic role in histidine biosynthesis.

Authors:  M Sissler; C Delorme; J Bond; S D Ehrlich; P Renault; C Francklyn
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

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