Literature DB >> 8576074

Sequence-specific and hydrolytic scission of DNA and RNA by lanthanide complex-oligoDNA hybrids.

M Komiyama1.   

Abstract

Totally synthetic and sequence-specific nucleases and ribonucleases, which hydrolyze DNAs and RNAs selectively at target sites, have been prepared. Lanthanide ions, which efficiently hydrolyze the phosphodiester linkages in nucleic acids, are attached to the 5'-end of synthetic DNA oligomers (sequence-recognizing sites) by use of an iminodiacetate ligand. Under physiological conditions, the hybrids selectively hydrolyze substrate DNA or RNA at the 3'-side of the sequence which is complementary with the DNA oligomers in the hybrids. The cerium(IV) ion is the most active as to DNA scission, whereas the europium(III), thulium(III), and lutetium(III) ions are the most effective for RNA scission. All the scissions proceed totally via hydrolysis of the phosphodiester linkages, in the same way as the scissions by natural nucleases and ribonucleases do. The artificial enzymes, which show far greater sequence-specificities than natural ones, exhibit high potential for application to molecular biology, biotechnology, and therapy.

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Year:  1995        PMID: 8576074     DOI: 10.1093/oxfordjournals.jbchem.a124961

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  7 in total

1.  Site-selective and hydrolytic two-strand scission of double-stranded DNA using Ce(IV)/EDTA and pseudo-complementary PNA.

Authors:  Yoji Yamamoto; Akihiko Uehara; Takafumi Tomita; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2004-11-01       Impact factor: 16.971

2.  Recombination of the GFP gene to the BFP gene using a man-made site-selective DNA cutter.

Authors:  Yoshihito Kitamura; Satoshi Mori; Wen Chen; Jun Sumaoka; Makoto Komiyama
Journal:  J Biol Inorg Chem       Date:  2005-12-10       Impact factor: 3.358

3.  Use of terbium as a probe of tRNA tertiary structure and folding.

Authors:  M R Hargittai; K Musier-Forsyth
Journal:  RNA       Date:  2000-11       Impact factor: 4.942

4.  Chemical and enzymatic properties of bridging 5'-S-phosphorothioester linkages in DNA.

Authors:  Y Xu; E T Kool
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

5.  Oligoamine-acridine conjugates for promotion of gap-selective DNA hydrolysis by Ce(IV)/EDTA complex.

Authors:  Yoji Yamamoto; Wataru Tsuboi; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2003-08-01       Impact factor: 16.971

6.  Preferential hydrolysis of gap and bulge sites in DNA by Ce(IV)/EDTA complex.

Authors:  Yoshihito Kitamura; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

7.  New macrocyclic terbium(III) complex for use in RNA footprinting experiments.

Authors:  Matthew J Belousoff; Phuc Ung; Craig M Forsyth; Yitzhak Tor; Leone Spiccia; Bim Graham
Journal:  J Am Chem Soc       Date:  2009-01-28       Impact factor: 15.419

  7 in total

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