Literature DB >> 8560779

Characterization of the hog cholera virus 5' terminus.

K Katayama1, C Kurihara, S Fukushi, F B Hoshino, K Ishikawa, H Nagai, T Ando, A Oya.   

Abstract

Hog cholera virus (HoCV) 5' terminus of the ALD and GPE(-) strains were analyzed by using rapid amplification of cDNA end method (5'RACE). An additional nine nucleotides were found at the 5' termini of genomic RNA in the ALD and GPE(-) strains of HoCV. These nine nucleotides were also conserved in BVDV and were suggested to form a hairpin structure at the 5' terminus by computer-assisted analysis. It seems possible that the secondary structure and/or the 5' terminus sequence has a significant role in the HoCV virus genome.

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Year:  1995        PMID： 8560779     DOI： 10.1007/bf01702600

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  12 in total

1.  Sequencing the termini of capped viral RNA by 5'-3' ligation and PCR.

Authors:  C W Mandl; F X Heinz; E Puchhammer-Stöckl; C Kunz
Journal:  Biotechniques       Date:  1991-04       Impact factor: 1.993

Review 2.  Togaviridae.

Authors:  E G Westaway; M A Brinton; M C Horzinek; A Igarashi; L Kääriäinen; D K Lvov; J S Porterfield; P K Russell; D W Trent
Journal:  Intervirology       Date:  1985       Impact factor: 1.763

3.  Translation of human hepatitis C virus RNA in cultured cells is mediated by an internal ribosome-binding mechanism.

Authors:  C Wang; P Sarnow; A Siddiqui
Journal:  J Virol       Date:  1993-06       Impact factor: 5.103

4.  5' and 3' untranslated regions of pestivirus genome: primary and secondary structure analyses.

Authors:  R Deng; K V Brock
Journal:  Nucleic Acids Res       Date:  1993-04-25       Impact factor: 16.971

5.  Oligodeoxyribonucleotide ligation to single-stranded cDNAs: a new tool for cloning 5' ends of mRNAs and for constructing cDNA libraries by in vitro amplification.

Authors:  J B Edwards; J Delort; J Mallet
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971

6.  Secondary structure of the 5' nontranslated regions of hepatitis C virus and pestivirus genomic RNAs.

Authors:  E A Brown; H Zhang; L H Ping; S M Lemon
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

7.  Nucleotide sequencing of 5' and 3' termini of bovine viral diarrhea virus by RNA ligation and PCR.

Authors:  K V Brock; R Deng; S M Riblet
Journal:  J Virol Methods       Date:  1992-07       Impact factor: 2.014

8.  Molecular cloning and nucleotide sequence of the genome of hog cholera virus.

Authors:  G Meyers; T Rümenapf; H J Thiel
Journal:  Virology       Date:  1989-08       Impact factor: 3.616

9.  Complete 5' noncoding region is necessary for the efficient internal initiation of hepatitis C virus RNA.

Authors:  S Fukushi; K Katayama; C Kurihara; N Ishiyama; F B Hoshino; T Ando; A Oya
Journal:  Biochem Biophys Res Commun       Date:  1994-03-15       Impact factor: 3.575

10.  Poliovirus RNA synthesis utilizes an RNP complex formed around the 5'-end of viral RNA.

Authors:  R Andino; G E Rieckhof; P L Achacoso; D Baltimore
Journal:  EMBO J       Date:  1993-09       Impact factor: 11.598
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  2 in total

1.  Nucleotide sequence of classical swine fever virus strain Alfort/187 and transcription of infectious RNA from stably cloned full-length cDNA.

Authors:  N Ruggli; J D Tratschin; C Mittelholzer; M A Hofmann
Journal:  J Virol       Date:  1996-06       Impact factor: 5.103

2.  Complete Genome Sequence of Bovine Viral Diarrhea Virus 2 Japanese Reference and Vaccine Strain KZ-91CP.

Authors:  Asuka Sato; Ken-Ichiro Kameyama; Makoto Nagai; Kentaro Tateishi; Keitaro Ohmori; Reiko Todaka; Kazuhiko Katayama; Tetsuya Mizutani; Makoto Yamakawa; Junsuke Shirai
Journal:  Genome Announc       Date:  2015-02-12
  2 in total

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